|
Name : Sama_1242 (Sama_1242) Accession : YP_927119.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Resistance Product : methionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : - Position : 1526273 - 1527451 bp Length : 1179 bp Strand : + Note : KEGG: son:SO1812 methionine gamma-lyase DNA sequence : ATGCAGGAGAAAAGCAAGTTAGCCACCCTCGTCGTTCATGGTGGCCACGAGCGTGATGCCATGGGGGCGCTGGTGAGTCC CCTCTATCAGAGTGCGACCTTTGTATTCGACAACGCCCGTCAGGGTGGTGCCCGTTTTGCCGGTGATGAGGCTGGCTATA TCTACACCCGACTGGGTAATCCCACGACAGCTGAGCTTGAGCGCAAGCTGGCCATTCTAGAAGGGGCCGAGGAAGCAGCA GCTACGGCGTCCGGTATGGGCGCTGTGTCAGCGGCGCTGCTTGCCAATCTGAGCCAGGGCGATCATCTGGTGGCGAGCCG GGCCGTGTATGGCTGTACCTTTGCCCTGATGACTGATCTGATGGCCCGTTTTGGGATTGAAGTAACTCTGGTGGATTTTA AAGAGCCTGCCGCCATCGAAGCCGCTATCCGTGACAATACCCGGGCGATTTTCTGTGAAACCCCGGTGAATCCCCATCTG GATGTATTCGACCTCGATGCCATTGCTGCCATCGGCAAGAGACACGGTTTGCTTACCATTGTCGATAACACCTTTATGAC TCCGCTGCTGCAGCGCCCGCTGGACCACGGCATTGATATGGTCATTCACAGCGCCACCAAGTACCTCAATGGTCATGGCG ATGTGATTGCCGGCATGGTGGCAGGCAGCAAGGAACAGATTGATAAAGTGAAATATCAAATCATCAAGGATATAGGCGCT GTGATGTCGCCCCATGATGCCTGGTTGATACTGAGGGGCATGAAAACCCTAGATGTGCGTGTGCAGCGCCACTGTGATAA TGCGGAAAAAATCGCGGATTTCCTTGAGGCTCACCCCAGGGTAGGGCGAGTCTACTATCCGGCGCTTAAGAGCCATCAGG GACACAGGTTCCTGGGAACGCAGATGCGCCGCGCCGGGGGCGTTATTGCCTTTGAACTTAAGTCGGATATCGAAGGTTCC ATCAATTTTGTCGACAGTCTCAAGGTGTTCACCATCGCTGTAAGCCTGGGGGATGCCGAGTCCCTTATTCAACACCCGGC ATCCATGACGCACTCACCATACACCCCCGAAGCGCGGCTTGAGGCGGGGATTACAGATACCTTGCTGAGAATTTCGGTAG GACTGGAAGATGTGGATGATTTGATTGCGGATTTATCTCAGGCTTTGGCAAAAATCTAA Protein sequence : MQEKSKLATLVVHGGHERDAMGALVSPLYQSATFVFDNARQGGARFAGDEAGYIYTRLGNPTTAELERKLAILEGAEEAA ATASGMGAVSAALLANLSQGDHLVASRAVYGCTFALMTDLMARFGIEVTLVDFKEPAAIEAAIRDNTRAIFCETPVNPHL DVFDLDAIAAIGKRHGLLTIVDNTFMTPLLQRPLDHGIDMVIHSATKYLNGHGDVIAGMVAGSKEQIDKVKYQIIKDIGA VMSPHDAWLILRGMKTLDVRVQRHCDNAEKIADFLEAHPRVGRVYYPALKSHQGHRFLGTQMRRAGGVIAFELKSDIEGS INFVDSLKVFTIAVSLGDAESLIQHPASMTHSPYTPEARLEAGITDTLLRISVGLEDVDDLIADLSQALAKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 6e-62 | 44 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 5e-63 | 43 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-64 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sama_1242 | YP_927119.1 | methionine gamma-lyase | BAC0207 | Protein | 6e-83 | 49 |
