Gene Information

Name : Sama_1017 (Sama_1017)
Accession : YP_926894.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : -
Position : 1232017 - 1232670 bp
Length : 654 bp
Strand : +
Note : catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine

DNA sequence :
ATGTTTACCGGGATCATTGAAGCCGTTGGCCAGTTAAGACGAATCGATCGTAAGGGCGATGATATTCGCCTGACGGTCGC
CAGTGGCAAGCTGGATTTATCCGATGTTCGCCTTGGCGACAGTATCGCCACCAATGGCGTGTGTCTGACCGTGGTGGAAT
GCCTTGCCGATGGTTATGTTGCCGATGTATCAGCTGAAACCGTGAAGCTCACCGGTTTTGGCGACTATCGTCCCGGCCAG
GCGGTGAATCTGGAAAAGGCTGTCACCCCAACCACCCGCCTTGGCGGACACCTGGTGAGCGGCCACGTGGATGGCCGAGC
CATGGTGGTCAGTCGCAGTCACCTGGGTAAAGCCATTGAGTTTTGGCTTGAAGCACCCGCCGAGCTTGCCCGTTATATTG
CCCACAAGGGCTCCATTACCATTGACGGGGTGAGTCTGACTGTAAATGAAGTGGACGGCAGCCGTTTTCGCCTGACCATA
GTGCCCCACACCGCAGGGGAAACCACCCTGATTGATTTGGCGGTGGGCGATAAGGTGAACCTCGAAGTGGATCAGATTGC
CCGTTATCTTGAGCGATTGATGCAACGCGGGGAAGAAAGTGTCTCCGGCGGTGTGACCCTGGATTTGCTTGCCCGCAGCG
GATTTATGCGCTGA

Protein sequence :
MFTGIIEAVGQLRRIDRKGDDIRLTVASGKLDLSDVRLGDSIATNGVCLTVVECLADGYVADVSAETVKLTGFGDYRPGQ
AVNLEKAVTPTTRLGGHLVSGHVDGRAMVVSRSHLGKAIEFWLEAPAELARYIAHKGSITIDGVSLTVNEVDGSRFRLTI
VPHTAGETTLIDLAVGDKVNLEVDQIARYLERLMQRGEESVSGGVTLDLLARSGFMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 2e-42 49
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 2e-42 49