Gene Information

Name : Noca_0646 (Noca_0646)
Accession : YP_921859.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Unknown
Product : succinate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 685580 - 686959 bp
Length : 1380 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: mlo:mll5719 succinate-semialdehyde dehydrogenase

DNA sequence :
GTGACGACGTTCGGCGTCGAGGACCCTGCCTCCCTCGAGATCATCGCGCAGGTGCCGGACCAGGGTCCCGACGAGGCACG
CGTCGCCGTCGACCGCGCGGCCGCGGCCTTCGCCGACTGGTCGCGCACCTCGCCCCGGCACCGCTCCGACGTGCTGCGCC
GCGCCTTCGACCTGATGATGCGCGATAGCGAGGAGCTGACCGGGCTGATCACCTCTGAGAACGGCAAGTCGCTGGTCGAC
GCCGCCGCCGAGGTTGGGTACGCAGCCGAGTTCTTCCGGTGGTTCTCCGAGGAGGCGGTCCGGCCGAGCGGTGAGTACGG
AGAGGCCCCGACCGGCGGCGTCCGCACCATCGTGACCCACCGTCCCGTGGGTGTCGCTGCCCTGGTAACCCCCTGGAACT
TCCCGGCCGCGATGGTGACCCGCAAGATCGCACCGGCACTCGCCGCCGGGTGCACCGTCGTGCTCAAGCCCGCCGCCGAG
ACCCCACTGACCGCATTGGCGGTTGGGCGGATCCTGAGTGAGGCGGGCGTGCCCGACGGCGCCGTCGAGATCGTCACGAC
CACTGACGCACCGGGCGTGGTGACCGCCTGGCTGAGCGACGACAGGGTCCGCAAGGTCTCCTTCACCGGCTCCACCGGTG
TCGGCCGCGCCCTGTTGCACCAGGCGGCCGACCGCGTCCTCAACGCGTCCATGGAGTTGGGCGGCAACGCGCCTGTCGTC
GTCACCGATGACGCCGACCTCGGCGCTGCTGTCGCCGGCACCATGATCGCCAAGTTCCGCAACAGCGGGCAGGCGTGCAC
AGCGGCCAACCGCATCTTCGTCCACAACGACGTCGCGTTCGACTTCGTCGCCCGTCTCGGCGCCGCGGTCGAGAAGCTCA
GTGTCGGCCCTGCCATCGACGGTGCCGCGATCGGCCCGCTTATCACGCAGGCTGCGCTGCAACGGGTCACCGAAGCGGTC
GACTTCGCCGTCCGAGAGGGTGCCCGCATCTCGCACCAGGCGCAGTTGCCGGAGGCGCCTGGCTACTTCTTCCCGCCGAC
CGTCCTCGCCGGGCTTGCCCCCGACGCGACGATCCTGCGCGAGGAGATCTTCGGCCCCGTCGCCCCGGTCGTCGTGTGGC
ACGACGAGGACGAGCTCCTCGAACTCGTCAACGACACCGAATATGGATTGGCTGCGTACGTCTTCGCAGGCGACATCGGC
CGCGCCGTCCGCCTAGGCGAACGCATCGACGCCGGCATGGTCGGCATCAATCGCGGCCTCGTATCGGACCCCTCCGCGCC
CTTCGGCGGCGTCAAGCAGAGCGGCCTCGGCCGCGAGGGCGCCCGCGAGGGACTGCGGGAGTTCCAAGAGACCCAGTACC
TCAGCGTTGACTGGTCCTGA

Protein sequence :
MTTFGVEDPASLEIIAQVPDQGPDEARVAVDRAAAAFADWSRTSPRHRSDVLRRAFDLMMRDSEELTGLITSENGKSLVD
AAAEVGYAAEFFRWFSEEAVRPSGEYGEAPTGGVRTIVTHRPVGVAALVTPWNFPAAMVTRKIAPALAAGCTVVLKPAAE
TPLTALAVGRILSEAGVPDGAVEIVTTTDAPGVVTAWLSDDRVRKVSFTGSTGVGRALLHQAADRVLNASMELGGNAPVV
VTDDADLGAAVAGTMIAKFRNSGQACTAANRIFVHNDVAFDFVARLGAAVEKLSVGPAIDGAAIGPLITQAALQRVTEAV
DFAVREGARISHQAQLPEAPGYFFPPTVLAGLAPDATILREEIFGPVAPVVVWHDEDELLELVNDTEYGLAAYVFAGDIG
RAVRLGERIDAGMVGINRGLVSDPSAPFGGVKQSGLGREGAREGLREFQETQYLSVDWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-94 50
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 1e-82 44