Gene Information

Name : Noca_4497 (Noca_4497)
Accession : YP_925681.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4755620 - 4756564 bp
Length : 945 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1436 ABC-type multidrug transport system ATPase component

DNA sequence :
ATGTCGGGCCCGGCCCGCGGCCAGCAGGCTGGAGCCATGATCACAGTCGAGTCCCTGACCAAGACGTACGGCGGCTTCAC
CGCCGTGGACGACGTCACCTTCACGGCGCGCTCCGGGCGCGTCACCGGCTTCCTCGGCCCGAACGGCGCCGGCAAGTCCA
CCACCATGCGGATCATGGTCGGGCTGACCCCCGCCACGTCCGGCACGGCGCAGGTCAGCGGCCGCCGGTTCGCCGACCTG
CCGAACCCGGGCCTCGAGGTCGGCGTCCTCCTCGACGCCTCCGCGCAGCACGCCGGCCGGACCGGCCGGGAGATCCTCAC
CATCGCCCAGCGCACCATGGGGCTGCCGGCCCGCCGGGTCGACGAGCTGCTCGACCTGGTCAGCCTGACCCCGGACGAGG
CCGGCCGCCGGGTGCGCAACTACTCCCTCGGCATGCGCCAGCGGCTCGGCATCGCCACCGCCCTGCTCGGCGACCCCGAG
GTGCTGATCCTCGACGAGCCCGCCAACGGTCTCGACCCGGCCGGCATCCGGTGGATGCGCGACCTGCTGCGCGGCTACGC
CGACCAGGGCGGCACCGTGCTGCTCTCCTCGCACCTGCTCCACGAGATCGAGGTGATCGCCGACGACCTGGTCGTGATCG
GCCAGGGCCGGATCGTGGCCCAGGGCACCAAGGCCGAGCTGCTCGCAGCAGCCGGCACGCTGGTGCGCACCCCCGACCTG
CCGACGCTCGCCCGGGCGCTCGTGTCCGCCGACGTCGAGTTCACCCGGACCGCCGACGCGCTGCGCGTCGAGGCCGACCC
CGACCTCGTCGGCCGGCTCGCGCTGGCCGCCGGCGTCCCCCTGACCGAGCTGCGCGCCGGCGACGGCGCCGGGCTGGAGG
AGATGTTCCTCGAGCTCACCGCAGACACCCAGCGCGACGAGATCTCCGAAGGAGCAGCAGCATGA

Protein sequence :
MSGPARGQQAGAMITVESLTKTYGGFTAVDDVTFTARSGRVTGFLGPNGAGKSTTMRIMVGLTPATSGTAQVSGRRFADL
PNPGLEVGVLLDASAQHAGRTGREILTIAQRTMGLPARRVDELLDLVSLTPDEAGRRVRNYSLGMRQRLGIATALLGDPE
VLILDEPANGLDPAGIRWMRDLLRGYADQGGTVLLSSHLLHEIEVIADDLVVIGQGRIVAQGTKAELLAAAGTLVRTPDL
PTLARALVSADVEFTRTADALRVEADPDLVGRLALAAGVPLTELRAGDGAGLEEMFLELTADTQRDEISEGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 2e-41 46
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 2e-41 46
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 2e-45 45
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 4e-49 42