Gene Information

Name : Noca_4367 (Noca_4367)
Accession : YP_925551.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 4617868 - 4618824 bp
Length : 957 bp
Strand : +
Note : PFAM: protein of unknown function DUF6, transmembrane; KEGG: sco:SCO2646 integral membrane protein

DNA sequence :
ATGTCTTCCGTGGAAACTACCTGGGGTACGTTGAGCCTGACGGCCCTGGCCCCGATCGCGTGGGGCTCGGGCTACTACGT
CACCGAGGCGTACCTGCCCCCGGACCGGCCGCTGTTCGGCGCGATGGTCCGGGCGCTCCCCTTCGGGCTGCTCCTGCTGG
CCTTCCGGCCCCGGCTCCCGCAGGGCGAGTGGTGGGCCCGAGCGCTGCTGCTCGGCATCCTCAACGTCGGGGCGTTCTTC
GTGCTGATCTTCGTGGCGGCGTACCGCCTGCCCGGCGGGCTGGCGGCGACCCTGACCGCGACCGCGCCGGTGATGATGAT
GCTGCTCGCCTGGGGGTTGGTCCGCGAGCGCCCGCGCGCCGCCTCGCTCGCGGGGGCAGCGGTGGGGTTCACCGGCGTCG
CGCTCCTGGTGCTGCGCGGCGGCGCCGCGGTCGACCCGGTCGGCGTCGCGGCGTCGTTCGCCGCGGTCGCGATGTCCTCC
CTCGGCTACATCCTCATCAAGAGGTGGGAGCCGCCGGTCGACCTGCTGACGTTCACGGCCTGGCAGCTGGTCGCCGGCGG
CCTGGCGCTGCTCCCGGTCGCGCTCGTCGTCGAGGGCGCCCCGCCGCCGCTGGACCTCCGTGCGGTCGGCGGCTTCCTCT
ACCTGGGCCTCGTGGCGACGGTGCTCGCGAACGTCGTGTGGTTCCACGGCCTGCGCCGGCTCCCGGCCGCCGGGGTATCA
CTGGTGGGCCTGCTGAACCCGGTCGCCGGCACCGTGGTCGGCGTCGCGCTGGCCGGGGAGATGTTCGGGCCGACGCAGGC
GCTCGGGATGCTCCTCGTGCTCGTCGGCATCCTCGCCGGCCAGCCCGCGATCGCGACGCGGCTGCGGATCCGGCGTCAGC
CGATCGTGACCCTGATCTCGTTGGACTCCAGCCCGGTGTCGGTGTCGACGACCCGGAACCGGTTCGGGCCCGAGTAG

Protein sequence :
MSSVETTWGTLSLTALAPIAWGSGYYVTEAYLPPDRPLFGAMVRALPFGLLLLAFRPRLPQGEWWARALLLGILNVGAFF
VLIFVAAYRLPGGLAATLTATAPVMMMLLAWGLVRERPRAASLAGAAVGFTGVALLVLRGGAAVDPVGVAASFAAVAMSS
LGYILIKRWEPPVDLLTFTAWQLVAGGLALLPVALVVEGAPPPLDLRAVGGFLYLGLVATVLANVVWFHGLRRLPAAGVS
LVGLLNPVAGTVVGVALAGEMFGPTQALGMLLVLVGILAGQPAIATRLRIRRQPIVTLISLDSSPVSVSTTRNRFGPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM AGK07028.1 PecM Not tested SGI1 Protein 2e-25 45
pecM AGK07086.1 PecM Not tested SGI1 Protein 2e-25 45
pecM ACN81012.1 PecM Not tested AbaR5 Protein 2e-25 45
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 2e-25 45