Gene Information

Name : Noca_4297 (Noca_4297)
Accession : YP_925481.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4539863 - 4540603 bp
Length : 741 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: cef:CE2778 putative 2-hydroxycyclohexanecarboxyl-CoA dehyrogenase

DNA sequence : 
ATGGGCAAGCTCGACTCCAAGATCGCGGTCGTCACCGGCGCCGGACAGGGCATCGGCAAGGCGATCGCCACGAAGCTGGC
GGCTGAGGGCGCCACCGTGGTGGTGACCGACGTCGACCACCAGGCCGCGAAGGAGACCGCCGCGGCACTCGACCACGGTG
CGATCGGCCTGCACGCCGACGTCACCGATCGCACCTCCGTCGACGCGATGGTCGACGAGGTGGTCGCGACCTTCGGGCGG
ATCGACGTACTCGTCAACAACGCCGGCTGGGACAAGGGCGAGGCGTTCGTCGACTCCGAGCCGGAGACGTGGGACCGGAT
CATCGGCATCAACCTCTACGGCGTGCTCAACACCTCCAAGAAGGTGCTGCCGATCATGGCCGCGCAGGGCTCCGGGAGCG
TGGTCAACATCGGGTCGGACGCCGGCCGGGTGGGCTCGTCGGGCGAGGCCGTCTACTCGGCGGCCAAGGGCGGCGTCATC
GCGTTCAGCAAGGCCACGGCCCGGGAGATGGCCCGCAGCCAGGTCAACGTCAACTGCGTCTGCCCGGGACCCACCGACAC
CGCGCTGTTCGCCTCCATGGGCGGGGACAAGCTCCGCGAGGCGCTCGTCAAGGCCATCCCGTTCCGCCGGCTCGGGCAGC
CCGAGGACCTCGCGAACGTGGTCGCCTTCCTGGCCTCCGACGAGGCCGGCTTCGTCACCGGACAGACCGTCAGCGTCAGC
GGCGGCCTCACGATGTCTTGA

Protein sequence : 
MGKLDSKIAVVTGAGQGIGKAIATKLAAEGATVVVTDVDHQAAKETAAALDHGAIGLHADVTDRTSVDAMVDEVVATFGR
IDVLVNNAGWDKGEAFVDSEPETWDRIIGINLYGVLNTSKKVLPIMAAQGSGSVVNIGSDAGRVGSSGEAVYSAAKGGVI
AFSKATAREMARSQVNVNCVCPGPTDTALFASMGGDKLREALVKAIPFRRLGQPEDLANVVAFLASDEAGFVTGQTVSVS
GGLTMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 6e-36 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-38 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-35 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-35 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-35 42