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Name : Noca_4184 (Noca_4184) Accession : YP_925368.1 Strain : Nocardioides sp. JS614 Genome accession: NC_008699 Putative virulence/resistance : Unknown Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 4422049 - 4423881 bp Length : 1833 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: fal: DNA sequence : GTGAGCGACTTGGTCGCGCGTATGAGGCGGCGCCGCGCGCCGCTCGCCATCGCGTTCGACGTGTGTGCCTGGTTGCTCGG CTACGCGGCGTTCGCCTGGCTTCGGCTCGACAGTGACGCCTCGAGCGTGCCGTGGCCGGAGGTGCTCGCCTTCGCGACCG TGACTGCGACGCTGTACGTGGCACTGGCGGCGCCCCTCCGGCTCCACCAGGGCCGCGCCCGCACCGCGAGCCTGGAGGAG ATGGTGCTCCTCGGGATGCTGATGGGCGGCGTCGGTGGCGGCGTCTTCCTGGTGAACCTGTTCGGCCAGTGGATCCCCCG CAGCATCCCGGCCGGGGCGACCTGCGGTGCGCTCGTGCTCGCCGCGTGGGCGCGGGCGAGCTGGCGGACCCTGCAGGAGC GCGACGAGCGCACCGGCGCCGGTGAGGACACCGAGCGGACGCTGGTGATGGGCGCGGGTGAGGCCGGCCGCGAGCTGATC ACCTCGATGCAGCGCGACCCGCTGCGGCGCTACCTGCCGGTCGGACTGCTCGACGACGATCCCTACAAGCGGCACCGCCG GCTGCGCGGCGTACCCGTCCTCGGGACCAGCTGCGACCTGGAGAAGGAGGTCGCGCGCACCGGGGCGACCATGGTCGTGA TCGCGATCCCCAGCGCCAGTGCCGAGACGGTCAACCGGCTCCGGCTCACGGCTCTGGACGCCCATGTGTCGGTCAAGGTG TTGCCGTCCACCACGCAGCTCCTCACCGACAGCGTCGGCATCCGCGACCTGCGGGACATCAACATCACCGACGTACTCGG CCGCAACCAGCTGGACACGGACGTCGCCTCGATCGCCGGCTACCTGGCCGGGCGGAAGGTGCTGGTCACCGGTGCCGGCG GCTCCATCGGCTCCGAGCTGTGCCGCCAGATCTACCGCTACCAGCCGGCCGAGCTGATGATGCTCGACCGTGACGAGTCC GCGCTCCACTCGGTCCAGCTCTCGATCCACGGCCGTGCCCTGCTGGACTCGGACGACGTCATCCTGTGCGACATCCGGGA CGAGAAGGCGGTGCGAACCATCTTCGCGAACCGTCGCCCCGACGTCGTCTTCCACGCCGCCGCGCTCAAGCACCTGCCGA TGCTCGAGCAGTACCCGGCCGAGGCCGTGAAGACCAACGTGATCGGCACCCGCACGGTTCTCGATGCCGCAGACCTCGTC GGTGTCGACAGGTTCGTGAACATCTCCACGGACAAGGCGGCGAACCCGTCCAGCGTCCTGGGCTACTCCAAGCGGGTCGC CGAGCGGATCACAGCCGCCCAGGCGCGCGAGGCTTCCGGGACGTATCTCTCGGTGCGCTTCGGGAACGTGCTCGGCAGCC GTGGCTCGGTGCTGGCGGCGTTCGCCCGGCAGATCGCCGCCGGTGGGCCGATCACGGTCACCCACCCGGACGTCAGCCGC TTCTTCATGACGATCGAGGAGGCCTGCCAGCTGGTCATCCAGGCGGCTGCGATCGGCGGGCCGGGGGAGGCGCTCGTCCT CGACATGGGCGAGCCGGTGAAGATCGTGGACGTCGCCGAGCAGCTGATCGAGCAGGCCGGCACGCCGGTGCCGATCGAAT ACACCGGGCTGCGCGAGGGCGAGAAGTTGCACGAGGAGCTCTTCGGCGAAGGCGAGCCGTGCGACGTCCGGCCGCGGCAC CCGCTGGTCTCGCACGTGCCGGTGCCACCGATCACCGACGGCGAGGTCCTGGGCCTCACCCTCGTCGGCGAGCCTGACGA CGTGCGGCAGGCGCTGCACGACGCGTGCCTGGTGTCGATCGAGGCCGACGACCCGTCCTCGCTGCGGAACTGA Protein sequence : MSDLVARMRRRRAPLAIAFDVCAWLLGYAAFAWLRLDSDASSVPWPEVLAFATVTATLYVALAAPLRLHQGRARTASLEE MVLLGMLMGGVGGGVFLVNLFGQWIPRSIPAGATCGALVLAAWARASWRTLQERDERTGAGEDTERTLVMGAGEAGRELI TSMQRDPLRRYLPVGLLDDDPYKRHRRLRGVPVLGTSCDLEKEVARTGATMVVIAIPSASAETVNRLRLTALDAHVSVKV LPSTTQLLTDSVGIRDLRDINITDVLGRNQLDTDVASIAGYLAGRKVLVTGAGGSIGSELCRQIYRYQPAELMMLDRDES ALHSVQLSIHGRALLDSDDVILCDIRDEKAVRTIFANRRPDVVFHAAALKHLPMLEQYPAEAVKTNVIGTRTVLDAADLV GVDRFVNISTDKAANPSSVLGYSKRVAERITAAQAREASGTYLSVRFGNVLGSRGSVLAAFARQIAAGGPITVTHPDVSR FFMTIEEACQLVIQAAAIGGPGEALVLDMGEPVKIVDVAEQLIEQAGTPVPIEYTGLREGEKLHEELFGEGEPCDVRPRH PLVSHVPVPPITDGEVLGLTLVGEPDDVRQALHDACLVSIEADDPSSLRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-70 | 42 |
