Gene Information

Name : Noca_3643 (Noca_3643)
Accession : YP_924830.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Unknown
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3866012 - 3866659 bp
Length : 648 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO6667 two-component regulator

DNA sequence :
GTGATCACGGTCGCGATCGCCGACGACCAGCCGCTCGTGCGCAGCGGGCTGCGGATGATCCTCGAGGGCGAGCCGGACAT
CGAAATCGTCGGCGAGGCGGCCGACGGCGCCGACGCGGTCGCCCTGGTGACGGCCGGAGCCCCCGACGTACTGCTGCTGG
ACGTGCAGATGCCCGAAGTCGACGGCCTGGCGGCGATGACCGAGATCGAGGCGTCGGAGTCGTCCACCCGCGTGCTGATG
CTGACGACGTTCGACCTCGACGAGTACGTCTACCAGGCGATGCGCGCCGGAGCCGCCGGCTTCCTCCTCAAGGACATGGC
CGGAGAGGACATCGTGGCCGCCGTGCGGCAGGTGGCCCACGGAGCCGACGCCCTGCTCGCCCCGGCGGTGACCCGCCGCC
TCGTCGACCGCTACACCCGCGAGCGACGGCGTCCGCCCGCGCCCGCCCTCGACCAGCTCACTCCGCGCGAGCACGACGTG
CTGCGGTTGATCGCGGCTGGTCTGTCCAACGCCGAGATCGCGGCCGAGCTGTTCATCGGGGAGACGACCGTGAAGACCCA
CGTAGCGCGGGTGCTGATGAAGCTCCGCCTGCGGGACAGGGTGCAGGCGGTCGTCCTGGCCTACGAGTCCGGACTGATGC
GGGACTGA

Protein sequence :
MITVAIADDQPLVRSGLRMILEGEPDIEIVGEAADGADAVALVTAGAPDVLLLDVQMPEVDGLAAMTEIEASESSTRVLM
LTTFDLDEYVYQAMRAGAAGFLLKDMAGEDIVAAVRQVAHGADALLAPAVTRRLVDRYTRERRRPPAPALDQLTPREHDV
LRLIAAGLSNAEIAAELFIGETTVKTHVARVLMKLRLRDRVQAVVLAYESGLMRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 1e-27 45