Gene Information

Name : Noca_3529 (Noca_3529)
Accession : YP_924716.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 3740200 - 3741654 bp
Length : 1455 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: sco:SCO4913 putative aldehyde dehydrogenase

DNA sequence : 
ATGCCTTCGCTCTTTGAGTACGCCCCCGCACCCGAGTCGCGCGCCGTGGTCGACATCAAGCCGTCGTACGGCCTGTTCGT
CAACGGTGCTTTCGTCGACGGCCACGGCGCGTCGTTCAAGACGATCAGCCCCGCGACCGAGGAGGTGCTCGCCGAGATCT
CCGAGGCCGACGAGTCCGACGTCGATGCGGCGGTGAAGGCCGCGCGTACCGCCTACGACAAGGTCTGGTCGCGGATGCCC
GGCCGCGAGCGCGCCAAGTACCTCTACCGGATCGCCCGGATCATCCAGGAGCGCAGCCGTGAGCTCGCCGTGCTGGAGTC
GCTCGACAACGGCAAGCCGATCAAGGAGTCGCGCGACGTCGACGTGCCGATCGCGGCGGCGCACTTCTTCTACTACGCCG
GCTGGGCGGACAAGCTCGAGTACGCGGGCCACGGCCGGGATCCGCAGCCGCTGGGCGTCGCCGCCCAGGTGATCCCGTGG
AACTTCCCGCTGCTGATGCTGTCGTGGAAGATCGCGCCGGCGCTGGCCTGCGGCAACACCGTGGTGCTCAAGCCCGCGGA
GACCACGCCGCTCAGCGCGCTGCTGTTCGCCGAGATCTGCCAGCAGGCCGACCTGCCGCCGGGCGTGGTCAACATCGTCA
CCGGAGCCGGCGGCACCGGCCAGGCGCTCGTCGGCCACCCCGGGGTCGACAAGGTCGCGTTCACCGGCTCGACCGAGGTC
GGCAAGGCGATCGCCCGGTCGGTCGCCGGCACCAGCAAGCGGGTCACCCTCGAGCTCGGCGGCAAGGCCGCCAACATCGT
CTTCGACGACGCGCCGATCGACCAGGCCGTCGAGGGCATCGTCGACGGGATCTTCTTCAACCAGGGCCACGTCTGCTGCG
CGGGCTCCCGGCTGCTGGTCCAGGAGAGCATCGCCGAGGACCTGCTCGAGCGGCTCAAGGCACGGATGTCCACGCTGCGC
ATGGGCGACCCGCTCGACAAGAACACCGACATCGGCGCGATCAACTCCGGCGAGCAGCTCAAGCGGATCCGCGAGCTCTC
CGAGGTCGGCGACGCCGAGGGTGCCGAGCGCTGGGAGGTCGCCTGCGACCTGCCCACCAAGGGGTTCTGGTTCCCGCCGA
CCATCTTCACCGGCGTCTCCCAGGCCCACCGGATCGCCCGCGAGGAGATCTTCGGCCCGGTGCTGTCGGTGCTGACCTTC
CGCACCCCGGCCGAGGCGCTCGAGAAGGCCAACAACACGCCGTACGGCCTGTCCGCGGGCGTGTGGACCGACAAGGGCTC
GCTGATCCTCAAGATGGCCGCCTCGCTGCGCGCCGGCGTGGTCTGGGCCAACACGTTCAACAAGTTCGACCCGACCAGCC
CGTTCGGTGGCTACAAGGAGTCGGGCTACGGCCGCGAGGGCGGCCGCCACGGGCTGGAGGCGTACCTAAGATCACCCCAC
GAAGGCGCGCGATGA

Protein sequence : 
MPSLFEYAPAPESRAVVDIKPSYGLFVNGAFVDGHGASFKTISPATEEVLAEISEADESDVDAAVKAARTAYDKVWSRMP
GRERAKYLYRIARIIQERSRELAVLESLDNGKPIKESRDVDVPIAAAHFFYYAGWADKLEYAGHGRDPQPLGVAAQVIPW
NFPLLMLSWKIAPALACGNTVVLKPAETTPLSALLFAEICQQADLPPGVVNIVTGAGGTGQALVGHPGVDKVAFTGSTEV
GKAIARSVAGTSKRVTLELGGKAANIVFDDAPIDQAVEGIVDGIFFNQGHVCCAGSRLLVQESIAEDLLERLKARMSTLR
MGDPLDKNTDIGAINSGEQLKRIRELSEVGDAEGAERWEVACDLPTKGFWFPPTIFTGVSQAHRIAREEIFGPVLSVLTF
RTPAEALEKANNTPYGLSAGVWTDKGSLILKMAASLRAGVVWANTFNKFDPTSPFGGYKESGYGREGGRHGLEAYLRSPH
EGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 2e-51 42
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 3e-51 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-72 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 8e-67 42
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 2e-50 41
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 2e-50 41
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 41
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 41
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 41
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 5e-51 41
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 2e-69 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-74 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-74 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-74 41
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 5e-51 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noca_3529 YP_924716.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 2e-72 42