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Name : Noca_3400 (Noca_3400) Accession : YP_924587.1 Strain : Nocardioides sp. JS614 Genome accession: NC_008699 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3603372 - 3605057 bp Length : 1686 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGCAGATCCACCCGAGCCACAGCACCGTCCACCGCACCGGATCGCGCGCCGACATCCGCGTGCCCTTCACCCGGGTCGC GCTCACCAACGGCGAGACGTTCGACCGGTACGCCACTGCGGGACCCGGCAGCGACCCCGAGGTCGGGCTGCCGCCCCTGC GCGCTGACTGGATCGCCCAGCGCGGCGACACCGAGGAGTACGCCGGCCGGGAGACCCAGCTGCTCGACAACGGCAGGGCC GCCATCCGACGGGGCGAGGCACGCGACCAGTGGCGAGGGACCAGAAGCCGGCCGCGGCGCGGTACCAGCACCGTCACCCA GATGCACTACGCCCGGCAGGGCGTGGTGACCCCGGAGATGGAGTACGTCGCGATCCGCGAGGGCTGCAACGTCGACCTGG TCCGCTCCGAGGTCGCCGCCGGGCGCGCGATCATCCCCGCCAACCTCAACCACCCCGAGGCCGAGCCGATGATCATCGGG CGCCGGTTCCTGGTCAAGGTGAACGCCAACATCGGCAATTCCGCGGTCACCAGCTCGATCGCCGAGGAGGTCGACAAGCT CACCTGGGCGGTCACCTGGGGTGCCGACACCGTCATGGACCTGTCCACCGGCGACGACATCCACACCACCCGGGAATGGA TCATCCGCAACTCACCGGTCCCGATCGGGACCGTCCCGATCTACCAGGCCCTGGAGAAGGTCGACGGCGACGCCAGCCGG CTGACCTGGGAGATCTTCCGAGACACCGTCATCGAGCAGTGCGAACAGGGCGTGGACTACATGACCATCCATGCCGGGGT GCTGCTGCGCTACGTGCCACTGACCGCGCAGCGCATCACCGGGATCGTCTCCCGCGGCGGGTCGATCATGGCCGGCTGGT GCCTGGCGCACCACCAGGAGAACTTCCTCTACACGCACTTCGACGAGCTGTGCGAGATCTTCGCACGCTACGACGTGTCC TTCTCGCTCGGCGACGGCCTGCGCCCCGGTTGCACAGCCGATGCGAACGACGAGGCGCAGCTCTCCGAGCTGCGTACCCT GGCCGAGCTCACCCAGCGTGCCTGGGAGCACGACGTCCAGGTGATGGTGGAAGGACCTGGGCACGTGCCGCTCAACCTGG TCGAGGAGAACGTCGTCCTGCAGCAGGACTGGTGCCACGGCGCCCCGTTCTACACCCTCGGCCCGCTGGCCACCGACATC GCACCCGGCTACGACCACATCACCTCCGCGATCGGCGCGGCGGCCATCGCCATGCACGGCACCGCCATGCTCTGCTACGT CACCCCCAAGGAGCACCTCGGACTGCCGAACCGCGACGACGTCAAGACCGGCGTGATCACCTACAAGCTCTCCGCGCACG CCGCCGACGTCGCCAAGGGCCACCCCGGAGCCCGCGACTGGGACGACGCCTTGTCCAAGGCCCGCTTCGAGTTCCGCTGG CACGACCAGTTCGCCCTCTCCCTCGACCCGCACACCGCCGAGTCCTTCCACGACGAGACGCTCCCGGCCGAGGCCAGCAA GACGGCGCACTTCTGCTCCATGTGCGGCCCGAAGTTCTGCTCGATGCGCATCAGCCAGGACGTACGCGACTACGTCACCT CAGGCATGGCCGAGAAGTCGGCGCAGTTCCTGGAGCTGGGCTCCTCGGTCTACGTCGAGGGTGATACCTACACCGCGGCA CCGTGA Protein sequence : MQIHPSHSTVHRTGSRADIRVPFTRVALTNGETFDRYATAGPGSDPEVGLPPLRADWIAQRGDTEEYAGRETQLLDNGRA AIRRGEARDQWRGTRSRPRRGTSTVTQMHYARQGVVTPEMEYVAIREGCNVDLVRSEVAAGRAIIPANLNHPEAEPMIIG RRFLVKVNANIGNSAVTSSIAEEVDKLTWAVTWGADTVMDLSTGDDIHTTREWIIRNSPVPIGTVPIYQALEKVDGDASR LTWEIFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTAQRITGIVSRGGSIMAGWCLAHHQENFLYTHFDELCEIFARYDVS FSLGDGLRPGCTADANDEAQLSELRTLAELTQRAWEHDVQVMVEGPGHVPLNLVEENVVLQQDWCHGAPFYTLGPLATDI APGYDHITSAIGAAAIAMHGTAMLCYVTPKEHLGLPNRDDVKTGVITYKLSAHAADVAKGHPGARDWDDALSKARFEFRW HDQFALSLDPHTAESFHDETLPAEASKTAHFCSMCGPKFCSMRISQDVRDYVTSGMAEKSAQFLELGSSVYVEGDTYTAA P |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 3e-170 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 3e-170 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-162 | 61 |
