Gene Information

Name : Noca_2425 (Noca_2425)
Accession : YP_923617.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 2585553 - 2586557 bp
Length : 1005 bp
Strand : +
Note : TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: pfl:PFL_4636 ornithine carbamoyltransferase

DNA sequence :
ATGCCTGTCAACCTTCGCGGGCGGCACCTGCTCAGCCTGCGCCACCACAGCGCCGACGAGATCCGCTACCTGCTCGACCT
CTCCCGCGACCTCAAGCGTGCGAAGTACGCCGGCAGCGAGCGGCAGCTCCTGCAGGGCCGCAACGTCGCGCTGATCTTCG
AGAAGACCTCCACCCGCACCCGCTGCGCCTTCGAGGTCGCGTCCTACGACCAGGGTGCGCACGTCACCTACATCGACCCC
GCGTCGTCCCAGCTGGGGCACAAGGAGTCGGTCAAGGACACCGCTCGCGTCCTCGGCCGCATGTACGACGCGATCGAGTA
CCGCGGCTTCTCCCAGCAGGTCGTCGAGGAGCTGGCCGAGTACGCCGGCGTCCCGGTCTTCAACGGCCTCACCGACGAGT
TCCACCCGACCCAGATGCTCGCCGACGTGCTCACCATGCGTGAGCACTGCGACAAGCCGCTGCACGAGATCGCGTTCGCG
TTCATGGGCGACGGCCGCAACAACGTGGCGAACTCGCTGCTGCTCGTGGCCGCCAAGCTCGGGATGGACGTCCGCATCGG
CGCCCCCAAGGAGCTCTGGCCCGAGGACGAGCTGGTCAAGCTCTGCCACGATCTCGCCGACGTCTCCGGTGCCCGGATCA
CGATCACCGACGACCCGACCCAGGCCGTGGCCGGCGTCGACTTCATCTACACGGACGTGTGGGTCTCGATGGGTGAGCCG
GTGGAGTCGTGGGCCGAGCGCGTCGAGCGCTGCCTGCCGTTCCAGGTGAACGCGGACCTGCTGCACGCCACCGGCAATGC
CAGGGTCAAGGTGCTGCACTGCCTGCCCGCGTTCCACAACACCGAGACGAAGGTCGGCCACCAGGTGGTGGCGCAGTACC
CGCAGCTCGCGAACGGCATCGAGGTCACCGAGGACGTCTTCGAGTCCGCGGCCAACATCTCCTTCGACCAGGCGGAGAAC
CGGATGCACACGATCAAGGCGCTCCTCGTGGCGTCGCTCGCGTGA

Protein sequence :
MPVNLRGRHLLSLRHHSADEIRYLLDLSRDLKRAKYAGSERQLLQGRNVALIFEKTSTRTRCAFEVASYDQGAHVTYIDP
ASSQLGHKESVKDTARVLGRMYDAIEYRGFSQQVVEELAEYAGVPVFNGLTDEFHPTQMLADVLTMREHCDKPLHEIAFA
FMGDGRNNVANSLLLVAAKLGMDVRIGAPKELWPEDELVKLCHDLADVSGARITITDDPTQAVAGVDFIYTDVWVSMGEP
VESWAERVERCLPFQVNADLLHATGNARVKVLHCLPAFHNTETKVGHQVVAQYPQLANGIEVTEDVFESAANISFDQAEN
RMHTIKALLVASLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 8e-87 60
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-87 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-87 59
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 59