Gene Information

Name : Noca_2312 (Noca_2312)
Accession : YP_923504.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Resistance
Product : dihydrofolate reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0262
EC number : 1.5.1.3
Position : 2462156 - 2462638 bp
Length : 483 bp
Strand : +
Note : PFAM: dihydrofolate reductase region; KEGG: tbd:Tbd_2039 dihydrofolate reductase

DNA sequence :
ATGACCCCCGGCGGCAAGCGCGTCGTCCTCGTCGCCGCCGTGGCGCGCAACGGCGTGATCGGCGACGGCCCCGACATCCC
CTGGCAGCTGCCCGGGGAGCAGCGGCTGTTCAAGGGCCTGACCTGGGGGCACATCCTGGTGATGGGCCGGGCGACCTACG
ACTCGATCGGCCGGCCGCTGCCCGGGCGCACCACGATCGTGCTCACCCGGTCCCCGGACTGGTCGGCCGAGGGGGTGCAT
GTCGCCCACGACCTGCCGGCGGCCCTCGCGCTCGCCGACACGCTCGAGGGCGAGGTGATGGTCGCCGGAGGCGGCCAGGT
GTACGCCGCCGCGCTGCCGGTCGCCGACGAGCAGGTGCTCAGCGAGGTGGACCTGGAGCCGCAGGGCGACGCGTTCTACC
CCGAGTTCGACCGCAGCGAGTGGCGCGAGACCGCCCGCGAGCAGCACGACGGGTACGACCGCGTGGTGCTTGTCCGGGCC
TGA

Protein sequence :
MTPGGKRVVLVAAVARNGVIGDGPDIPWQLPGEQRLFKGLTWGHILVMGRATYDSIGRPLPGRTTIVLTRSPDWSAEGVH
VAHDLPAALALADTLEGEVMVAGGGQVYAAALPVADEQVLSEVDLEPQGDAFYPEFDRSEWRETAREQHDGYDRVVLVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dfrA12 ACF06156.1 dihydrofolate reductase Not tested Tn5036-like Protein 6e-26 48
dfrA5 AFG30110.1 dihydrofolate reductase Not tested PAGI-2 Protein 9e-18 45
dfrA5 AET25387.1 dihydrofolate reductase Not tested PAGI-2(C) Protein 9e-18 45
dfrA1 ADZ05803.1 trimethoprim-insensitive dihydrofolate reductase Not tested AbaR3 Protein 4e-19 44
unnamed AEL12695.1 DfrA5 Not tested AbaR21 Protein 4e-19 44
dfrA15 AGK07099.1 DfrA15 dihydrofolate reductase Not tested SGI1 Protein 5e-18 43