Gene Information

Name : Noca_2198 (Noca_2198)
Accession : YP_923392.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2347243 - 2347650 bp
Length : 408 bp
Strand : -
Note : PFAM: regulatory protein, MerR; KEGG: nfa:pnf2580 putative transcriptional regulator

DNA sequence :
ATGCGGACCAAGGAACTGGCGGATCGAGCCGGCGTGAACAGCGAGACCCTGCGCTACTACGAACGCCGCGGCCTGTTGTC
TGAACCACCACGCACTCCGGGCGGCTATCGCGACTACCCGTCCTCGACCGTTGGCCTGCTGCTGTTCATCAAGCGCGCCC
AAGAGCTGGGATTCAGGCTGGATGAGGTGGATGAACTGCTTCATCTCGATGCCGGTGGCCCGGAAAGCTGCGATGCGGCT
CGTGGGCTGGCCGAGCAGCGCAGGGCCGACCTGCAGCGGAGGATCTCCGATCTCCAACGGATGCACGACTCGCTGACCGC
CCTGGTGGACACCTGCGAACTTCCCCGGGCTGACCGCACATGCGCTCTGCTCGACGCTCTGACAGTCACACGAGAGGTGG
TCCGATGA

Protein sequence :
MRTKELADRAGVNSETLRYYERRGLLSEPPRTPGGYRDYPSSTVGLLLFIKRAQELGFRLDEVDELLHLDAGGPESCDAA
RGLAEQRRADLQRRISDLQRMHDSLTALVDTCELPRADRTCALLDALTVTREVVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 2e-20 44
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 7e-23 43
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 9e-23 43
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 1e-22 43
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 4e-22 41
merR AFG30124.1 MerR Not tested PAGI-2 Protein 4e-22 41
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 6e-22 41
merR AGK07025.1 MerR Not tested SGI1 Protein 6e-22 41
merR AGK07083.1 MerR Not tested SGI1 Protein 6e-22 41
merR ACK44535.1 MerR Not tested SGI1 Protein 4e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0682 Protein 3e-22 44
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0232 Protein 3e-22 43
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0684 Protein 1e-22 43
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0687 Protein 3e-22 43
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0683 Protein 2e-22 43
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0689 Protein 1e-21 43
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0688 Protein 1e-23 42
Noca_2198 YP_923392.1 MerR family transcriptional regulator BAC0686 Protein 8e-23 42