|
Name : Noca_2030 (Noca_2030) Accession : YP_923227.1 Strain : Nocardioides sp. JS614 Genome accession: NC_008699 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 2174177 - 2175616 bp Length : 1440 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5505 integrase, catalytic region DNA sequence : ATGGCGACGAAGGACTGGAGCAAGAAGACCAGCGATGCGCCGGAGGGGCTTCGTCGGCAGTGGCGTGCTGATCGGGCGCT GAGGCCGGCGATGCGCTCGCCCGGGCGACCGGACCCGTCGCGGGTGGTGCAGCGACAGTTCTGGCGGCAGATCGCCACGG GCGTCACGACGGTGGAGGCGTCGATGGCCGTGGGCGTGTCGTGGCCGGTCGGTGCTCGCTGGTTTCGCCACGCTGGCGGC ATGCCGCCGATCTCGCTGGCCGAGCCCACCGGCCGCCACCTGACCTTCGAGGAACGCGAGGAGATCGCGATCCTGCGCGC CAAGGACAAGGGCGTGCGCGAGATAGCCCGTGCGATCGGGCGTGACCCGGGGACCGTCTCACGCGAACTTCGTCGCAATG CAGCGACTCGTGGCGGCAAGCAGGAGTACCGCGCTGGCGTAGCGCAGTGGAAGGCACAGCAGGCGGCGAAGCGTCCCAAG ACCGCGAAGCTCGTGACCAACGAGCGGTTGCGTGAGTACGTGCAGGATCGGCTCGCCGGCAACGTCCGCCGTCCCGACGG CACGATCGTGCCGGGTCCGACACCGCCGCCGTGGAAGGGCCTGAACAAGCCGCATCGCCGGGACAGGCGGTGGTCGACGG CTTGGAGCCCGGAGCAGATCGCCCAGCGCCTGAAGGTCGAGTTCCCCGATGATGAGTCCATGCGCATCAGCCACGAGGCG ATCTACCAGTCGCTGTTCATCGAGGGCCGCGGTGCGCTCAAGCGCGAACTGGTCACCTGTCTGCGCACCGGGCGTGCGCT GCGGGAGCCGCGGGCCCGGTCACGGAACAAGGCACAGGGGCACGTGACCGCCGATGTCGTTCTCAGCGAGCGCCCCGCTG AGGCAGACGACCGGGCCGTCCCTGGCCACTGGGAGGGCGATCTGATCATCGGCACGGGTCGGTCTGCGATCGGCACCCTC GTCGAGCGCAGCAGTCGCTCAACGCTCCTGGTCCATCTGCCGCGACTGGAGGGCTGGGGTGAGAAGCCGTACGTCAAGAA CGGGCCATCACTCGGTGGCTACGGGGCCGTCGCGATGAACACCGCGCTGACCGCGTCGATGACCAAGCTGCCCGAGCAGC TGCGCAAGACCCTGACGTGGGACCGTGGCAAGGAACTCTCGGGCCACGCGTTGTTCGCGGTGGCGACCGGCACGAAGGTG TTCTTCGCCGACCCGCACTCGCCGTGGCAGCGACCGAGCAACGAGAACACCAACGGCCTGTTGCGCCAATACTTCCCCAA GGGCACCGACCTGTCGCGCTGGTCCGCCGAGGACCTGGAGGCCGTCGCCTATGCGCTCAACAACCGGCCCCGCAAGGTCC TCGGGTGGAAGACACCCGCTGAGGTCTTCGAGGAGCAACTACGCTCCCTTCAACAACCCGGTGTTGCATCGACCAGTTGA Protein sequence : MATKDWSKKTSDAPEGLRRQWRADRALRPAMRSPGRPDPSRVVQRQFWRQIATGVTTVEASMAVGVSWPVGARWFRHAGG MPPISLAEPTGRHLTFEEREEIAILRAKDKGVREIARAIGRDPGTVSRELRRNAATRGGKQEYRAGVAQWKAQQAAKRPK TAKLVTNERLREYVQDRLAGNVRRPDGTIVPGPTPPPWKGLNKPHRRDRRWSTAWSPEQIAQRLKVEFPDDESMRISHEA IYQSLFIEGRGALKRELVTCLRTGRALREPRARSRNKAQGHVTADVVLSERPAEADDRAVPGHWEGDLIIGTGRSAIGTL VERSSRSTLLVHLPRLEGWGEKPYVKNGPSLGGYGAVAMNTALTASMTKLPEQLRKTLTWDRGKELSGHALFAVATGTKV FFADPHSPWQRPSNENTNGLLRQYFPKGTDLSRWSAEDLEAVAYALNNRPRKVLGWKTPAEVFEEQLRSLQQPGVASTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDC7B_2059 | YP_005163500.1 | transposase-like protein | Not tested | Not named | Protein | 0.0 | 77 |
| CDC7B_2034 | YP_005163475.1 | transposase-like protein | Not tested | Not named | Protein | 8e-158 | 76 |
| DIP0764 | NP_939135.1 | transposase | Not tested | Not named | Protein | 8e-165 | 76 |
