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Name : Noca_0174 (Noca_0174) Accession : YP_921406.1 Strain : Nocardioides sp. JS614 Genome accession: NC_008699 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 187506 - 188780 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGATCCCCGTGTCCTCCGGGACGAGCCCGACCGCGTGCGCGCCGCCCAGGTCAAGCGCGGTCTGTCCGACGAGGT CGTGGACCACGCGCTGTCCGCGGACGGCGAGCGTCGCCGGGCGATCGCCGCGTTCGAGGCCAAGCGGGCCGAGCAGAAGC AGCTCGGCAAGCTGATCCCGCAGGCCCAGGGTGAGGAGAAGCAGGCGCTGCTGGCGCAGACCAAGACCCTCGCTGCCGAG GTCAAGCAGGCCGAGGCGGCCCAGGCCGTGGCCGAGGAGGCCTGGCAGGCGGCCCTGATGAGCATCCCGAACCTCGCGGC CGACGAGGCGCCCGCCGGCGGCGAGGACGACTACGTCGTGCTCGAGGAGATCGGCACCCCCCGCGACTTCGCGGCCGACG GCTTCGAGCCGCGCGACCACATCGAGCTGGGCCGGATGCTCGGCGCGATCGACCTCGACCGGGGCGCCAAGGTGTCCGGG TCGCGGTTCTACTTCCTCACCGGCGCCGGGGCCGAGCTCGAGCTGGCGCTGGTCAACCTGGCCATGCAGCAGGCCCGCGA GTCCGGCTTCACCCCGGTCATCGCCCCCTCGATGGTCAAGCCGCGCGCGATGGACGGCACCGGGTTCCTCGGCCAGGCGG CCGACGACGTCTACCGGATCGAGGGCCAGGACATGTACCTCGTCGGGACGTCCGAGGTCCCGATGGCGGCGTACCACTCC GACGAGATCCTCGACGGCGGCGCGCTGCCGCTGCGCTACGCCGCGTTCAGCCCGTGCTTCCGCAAGGAGGCCGGCTCGCA CGGCAAGGACACCAAGGGCATCATCCGGGTGCACTGGTTCGACAAGGTCGAGATGTTCGTCTACACCACGACCGAGGAGT CGTACGCCGAGCACCAGCGGCTGCTGGCGTGGGAGAAGGAGTTCCTCGAGAAGCTCGAGCTCGCCTACCGGGTGATCGAC GTCGCCGCCGGTGACTTGGGCCTGTCCGCGCAGCGGAAGTTCGACTGCGAGGCCTGGATCCCCACCCAGGGCCGCTACCG CGAGCTCACCTCGACGTCGAACTGCACCGAGTTCCAGACCCGCCGCCTCGACACCCGCGGCCGGTTCGGGTCGGAGATCA GGCCGATCTCGACCCTCAACGGCACCCTGTGCGCGATCACCCGCACGATCGTGGCGGTGCTCGAGACCCACCAGCAGGCC GACGGCTCGGTCCGGGTGCCGAAGGCGCTCCAGCCCTGGCTGGGCCGCGAGGTCCTGGAGCCGGTCACCACGTGA Protein sequence : MIDPRVLRDEPDRVRAAQVKRGLSDEVVDHALSADGERRRAIAAFEAKRAEQKQLGKLIPQAQGEEKQALLAQTKTLAAE VKQAEAAQAVAEEAWQAALMSIPNLAADEAPAGGEDDYVVLEEIGTPRDFAADGFEPRDHIELGRMLGAIDLDRGAKVSG SRFYFLTGAGAELELALVNLAMQQARESGFTPVIAPSMVKPRAMDGTGFLGQAADDVYRIEGQDMYLVGTSEVPMAAYHS DEILDGGALPLRYAAFSPCFRKEAGSHGKDTKGIIRVHWFDKVEMFVYTTTEESYAEHQRLLAWEKEFLEKLELAYRVID VAAGDLGLSAQRKFDCEAWIPTQGRYRELTSTSNCTEFQTRRLDTRGRFGSEIRPISTLNGTLCAITRTIVAVLETHQQA DGSVRVPKALQPWLGREVLEPVTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-54 | 45 |
