Gene Information

Name : Noca_1502 (Noca_1502)
Accession : YP_922703.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1592823 - 1593578 bp
Length : 756 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO1335 putative oxidoreductase

DNA sequence :
GTGACCGCGGCGCCGACCCCGGTCACGCTGATCACCGGCGGCACCCGCGGGATCGGCGCGGCCACGGCGCTCCGGCTCGC
CAGGGACGGCCACGACCTGGTGCTCGGCTACGCCCGCGACGTCCGCGCCGCCGAGGAGGCGCGCCTCGCGGCCGAGGACG
CGGGGGCCCGCTGCGTCGTGGTGCGCGCCGACCTCACCGCGCCGGACGGCGTCGCGGAGCTGTTCGCCCGGGCCGCCCAG
CACGGCCGGCTGACCGGCGTCGTCAACAATGCCGGCGCCACCCTGCACCTCGGCCCGCTGGCCGAGACCCCGGTGGAGGT
CGTGCAGGCGACCGTCGACCTCAACCTCACCGCCGCTCTCCTCGTGGCGCGCGCCGCCGTCCGCGCGCTGGGAACGTCGT
ACGGCGGTGCCGGCGGCGTGCTCGTCAACGTCAGCTCGGGTGCGGCGACGCTCGGCGCGCCCGGCGAGTACGTGCAGTAC
GCCGCGGCCAAGGCCGGGGTCGACGCGCTGACCGTCGGGCTGGCGCAGGAGGTCGCGGGCGAGGGGATCCGCGTCGTCGG
GGTGGCGCCGGGCATCGTGCGGACCCGGATCCACGCCGACGCGGGCGAGCCCGATCGGGTCGACCGGGTCGGGCGGCTGG
TGCCGCTCGGTCGCGCCGGCGAGCCGGGGGAGGTGGCCGACGCGGTCGCCTGGCTGATGAGCGCAGAGGCGACGTACGTC
ACCGGCACGACGCTGCGGGTGGCCGGCGGCCGCTGA

Protein sequence :
MTAAPTPVTLITGGTRGIGAATALRLARDGHDLVLGYARDVRAAEEARLAAEDAGARCVVVRADLTAPDGVAELFARAAQ
HGRLTGVVNNAGATLHLGPLAETPVEVVQATVDLNLTAALLVARAAVRALGTSYGGAGGVLVNVSSGAATLGAPGEYVQY
AAAKAGVDALTVGLAQEVAGEGIRVVGVAPGIVRTRIHADAGEPDRVDRVGRLVPLGRAGEPGEVADAVAWLMSAEATYV
TGTTLRVAGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 1e-32 42
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 8e-34 42