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Name : Noca_1128 (Noca_1128) Accession : YP_922331.1 Strain : Nocardioides sp. JS614 Genome accession: NC_008699 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1195424 - 1197115 bp Length : 1692 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs DNA sequence : ATGACGGTGCGCGCACAGACCTCCGGAGACACCGTGCGTGCCCTGGTCGAGGGCGGCTGGATCACCCGCGACCAGCTCAG CGAGGCGGGCCGGCTCGCGGACGAGCGGTCCCAGACCGTGCTCGAGGTGCTGCTCGAGAGCGGCTGGGTGGACCGCACCA CGGTCGTGCGCACCGCAGCCGCCTCGGCCGGCCTGGAGTACGTCGAGCTCACCGACTTCATCGTCGACATGGCGGCCGTG AGCCTGCTGCCGGCGGAGTTCGCCCGCCGCACCGGCGTACTGCCGCTGGTCCACGAGGACGGCGAGCTGCTGGTGGCCGT GAGCGTGCGCCAGGCGGGCGACATCGAGCTCAAGGACGACCTGAGCCGGCTGACCCGCAGCCGGGTCCGCTTCGCGATCG CCGGCCGCAGCGACATCGACGCCCGGATCAACCAGGTCTACCGCGCCGAGGGCGAGCTCACCGACATCACCTCCGACCTG GCGCCCGAGGACGAGGTCGACGACCTCAGTACCCTCACCGAGGTCTCCGACGAGGCGCCGGTGGTCCGCTTCGTCAACCT GCTGATCAACCAGGCGATCAACGACCGCGCCTCGGACATCCACATCGAGCCGACCGAGCGGGACATGCGGGTCCGGTACC GGATCGACGGGGTGCTCCACGACGCCCACCGCTCCCCGAAGAGCATCCAGAACGGGGTGATCTCGCGCCTCAAGATCATG GCCGAGATGAACATCGCCGAGCGTCGGGTGCCGCAGGACGGCCGGATGTCGGTCACCCACCAGGGCCGGCGCATCGACCT CCGCGTCGCCACCCTCCCGACCGTGTGGGGCGAGAAGGTGGTCGCCCGGATCCTGGACACCTCCAACACCCAGCTCGGCC TCGACGACCTGGGGTTCAGCAACGAGAACTACGAGCGCTACCGGGCCTCGTACACCAAGCCCTACGGGATGATCCTGGCG ACCGGGCCGACCGGGTCCGGCAAGTCGACGACGCTCTACGCGACGCTCAACCTGCTCAACCGGCCCGACGTCAACGTGAT CACCGTCGAGGACCCGGTGGAGTACCGCCTGCCGGGGATCAACCAGGTCCAGACGAACGCGAAGGCGGGGCTGACCTTCG CCTCCGCGCTGCGCTCGATCCTGCGCTCGGACCCCGACATCGTGCTGATCGGCGAGATCCGCGACCACGAGACCGCCCAG ATCGCGGTCGAGGCCGCGCTGACCGGCCACCTGGTGCTCTCGACGCTGCACACCAACGACGCGCCCTCGGCGGTGACCCG CCTGATCGAGATGGGCATCGAGCCGTTCCTGGTCGGGTCCGCGCTCGACGCCGTACTCGCGCAGCGGCTGTGTCGCTCGC TCTGCGAGCGCTGCAAGCAGGCCTACCAGCCGGATCCGGCGGAGCTGCAGCGGATCGGCTTCCCGTGGGCGGAGGGCGCG GAGGTGCCGGTGCTGTACCGGCACGTCGGCTGCTCCTCCTGCTCGCAGACCGGCTACCGCGGCCGGATGGCGCTGCACGA GGTGATGACGGTCAGCGAGGAGGTCTCGCGGCTCGCCGTCGCGCGCGCGTCGACCGACGAGGTCGGCCGCACCGCCCGGG AGCAGGGGATGACCACCTTGAAGTCGGACGGCTGGCAGAAGGTGCTGCAGGGCCGCACCTCCATCGAGGAGGTCCTCCGG GTCGTCGCCTGA Protein sequence : MTVRAQTSGDTVRALVEGGWITRDQLSEAGRLADERSQTVLEVLLESGWVDRTTVVRTAAASAGLEYVELTDFIVDMAAV SLLPAEFARRTGVLPLVHEDGELLVAVSVRQAGDIELKDDLSRLTRSRVRFAIAGRSDIDARINQVYRAEGELTDITSDL APEDEVDDLSTLTEVSDEAPVVRFVNLLINQAINDRASDIHIEPTERDMRVRYRIDGVLHDAHRSPKSIQNGVISRLKIM AEMNIAERRVPQDGRMSVTHQGRRIDLRVATLPTVWGEKVVARILDTSNTQLGLDDLGFSNENYERYRASYTKPYGMILA TGPTGSGKSTTLYATLNLLNRPDVNVITVEDPVEYRLPGINQVQTNAKAGLTFASALRSILRSDPDIVLIGEIRDHETAQ IAVEAALTGHLVLSTLHTNDAPSAVTRLIEMGIEPFLVGSALDAVLAQRLCRSLCERCKQAYQPDPAELQRIGFPWAEGA EVPVLYRHVGCSSCSQTGYRGRMALHEVMTVSEEVSRLAVARASTDEVGRTAREQGMTTLKSDGWQKVLQGRTSIEEVLR VVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-95 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-95 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Noca_1128 | YP_922331.1 | type II secretion system protein E | VFG1880 | Protein | 1e-93 | 48 |
| Noca_1128 | YP_922331.1 | type II secretion system protein E | VFG2048 | Protein | 2e-94 | 46 |
| Noca_1128 | YP_922331.1 | type II secretion system protein E | VFG0182 | Protein | 3e-94 | 44 |
| Noca_1128 | YP_922331.1 | type II secretion system protein E | VFG1876 | Protein | 2e-87 | 41 |
