Gene Information

Name : Tpen_1775 (Tpen_1775)
Accession : YP_921173.1
Strain : Thermofilum pendens Hrk 5
Genome accession: NC_008698
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1717928 - 1718824 bp
Length : 897 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1469 ABC transporter, ATP-binding protein

DNA sequence :
GTGAGTGAGGAAGCCCTAGTCTTAAGGGACATCTGGAAGATCTACAGGACGCAGTCCGAGGAGATCCCCGTCCTGAAGGG
CGTTAACCTCTCGGTGAATCAGGGGGAGCTAGCAATCATAATGGGGCCCAGCGGTAGCGGTAAGAGCACCCTGCTCTCCA
TAGCGGGAGGGCTCGAAAGGCCATCGAAGGGGAGGGTCATCGTGGGCGGTGTCGACATAACGGACCTAGACGAGGACGAG
CTGACGAAGATAAGGGCGAGGAAGATAGGCTTCGTATTCCAGTCATTCAACCTGATACGCAACCTCACGGCCGTGGAGAA
CGTAATGATGCCGCTGATATTCACGGGTATGTACTCCTGGAGGCAGGCCCGCGAGATAGCACTCAAAATGCTGGAAATAG
TGGGGCTCAAGGGACACGAGGAGAAGTTCCCTAGGCAGCTTAGCGGGGGGCAGCAACAGAGAGTCGCCATCGCGAGGGCG
CTCGCCCCGAGCCCCGACATAATACTCATGGACGAGCCGACGGGTAGCCTCGACGTGGACTCAGCGTCGAGAGTCCTCTC
GCTCGTTAAGTGGCTCAACGAGGCCTTCGGGCAGACGATAATAATCGTTACTCACAACCCGGAGATAGCCGAGCTCGCCA
CGAGGACGTTCTACATAAGGGGCGGGGAAATATACCAGCAACCACCCACGTCGACTCTCGCCGACAAAGTGAAGGAGCTA
AAGTCCTCCGCTGGTTACGGGAGCTTCGCGAAGGTACAGCTAGACCTGCTGAAAATAAAGCTGGAAGCCTTGGAGGCCGC
AGCCAAGCAGGGGAAAATCCCCCCAGAGGTTCTGGAAGGAGAGTTGAAGTCCCTCGAAGCCAGGATATCCAAGCTGGAGA
AGTACGCCTCCTCGTAA

Protein sequence :
MSEEALVLRDIWKIYRTQSEEIPVLKGVNLSVNQGELAIIMGPSGSGKSTLLSIAGGLERPSKGRVIVGGVDITDLDEDE
LTKIRARKIGFVFQSFNLIRNLTAVENVMMPLIFTGMYSWRQAREIALKMLEIVGLKGHEEKFPRQLSGGQQQRVAIARA
LAPSPDIILMDEPTGSLDVDSASRVLSLVKWLNEAFGQTIIIVTHNPEIAELATRTFYIRGGEIYQQPPTSTLADKVKEL
KSSAGYGSFAKVQLDLLKIKLEALEAAAKQGKIPPEVLEGELKSLEARISKLEKYASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpen_1775 YP_921173.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-46 48
Tpen_1775 YP_921173.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-32 44
Tpen_1775 YP_921173.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-38 42
Tpen_1775 YP_921173.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-38 41