Gene Information

Name : Tpen_1480 (Tpen_1480)
Accession : YP_920880.1
Strain : Thermofilum pendens Hrk 5
Genome accession: NC_008698
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, B subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1429651 - 1431756 bp
Length : 2106 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dge:Dgeo_2849 potassium-translocating P-type ATPa

DNA sequence :
ATGCCGCCCGACGTGAAGATTCAGTGGACCAGCGTGCTCTGGGAATCGGCCAAAAAGCTCAACCCGGCGTACCTCTTCGG
CGAGAACCCGATAATGTTCGTAGTGGAGCTCGGCGCCTTCTTTACGGCCGTCTACGCGACCCTCGAGGGGCTCCGCGAGG
GCGCCGCCAGCGCCCTCCACGTGCAACTGCTAGTCATACTGCTCGCAACGGTCTGGTTCTCCACGCTCTCGGAGTCCATC
TCGGAGCACCAGGCGAGAGCGAGGGTCGACTACCTCAGGAGCCTCGAAAAGGACGTAGTAGCGCATAAGCTCGTAGGTGA
CCGTGTCGTCGACGTGCGCTCCTCGGAGCTTGTGCCAGGCGACGTCGTGGTGGTTGGCGAGGGGGAGTACGTACCCAGGG
ATGGCTACGTGCTAGAAGGCATAGCGTACGTAGACGAATCCATGCTGACGGGCGAGTCGGAGCCCGTCGAGAAGAAGAAG
GACGACAGGGTGATAGGCGGCACCAGGGTCGTTAGGGGGAGGATCAGGGTGGAGATAGTCGCGGAGCCCGGTAAAAGCTA
CATCGACCGGCTCATGGCGCTGATCCAGACGGCCAAGAGGCCGAAGATGAAGAGCGAAGTCATGCTCTCGATACTCCTCG
GCGGACTCTCGCTAACGTTCCTCGTGATAACCGCTTCGCTGTACTTCGCCCTTAGATCGGTGGGCGGCTGGGCAGACCCC
GTGCTCGCGGTCGCATTCCTGGTGGCGCTGATGCCGACGACTATAGGGGGGCTTCTCCCGGCGATAGGCGTGGCTGGGGT
CACGAGGCTGATGGCTGAGAACATCGTAGCTAAGTCCGGGAAGGCGGTCGAAGCCGCGGGGGACGTAGACGTGATAGTAT
TCGACAAGACGGGCACTATAACCGAGGGCTCTAGGAGCGCGGTGGCTTTCATCCCGCTAAAGAACTACACCGAGAGAGAC
GTCGCGGTGGCGGCGTACCTGGCCTCAGTGGGGGACAGGACCCACGAGGGGATCTCTATCATAGAGCTCGCGAAGTCCAA
GGGCTACGTACCGGAAGACCTGCTGGTAAACGAGGCTCTCTCGGCCAGGAAGATAAGCTTCGACGTGCGCACAAGGTTCA
GCGGGGTGGAGTTCTCCTGGTACCGCAGGAAGAGCCCCTTCGCCGGGACAGTCACTCCTCTAAGCGAGGTGTCGAGGCGC
ATCCTGGAGGCGAGGGAGAGGGGCGAGAGGGTAACCGTGATAAAGGGCTCCGTGGACTCGGTGTTGGAGGTAGTGAGGGA
AGATAGGGCTACTAGGGAGGCTATAGCCCGCATAGTCGAGGAGGTGGGTAGGAGGGGCGAGACCCCGCTACTCGTCGCGT
TGAACGACGAGGCTGTGGGGGTAGTCGTACTGAAGGATAGGATCAAGGAGGGGGTGAAGGAGAAGATCAGGAGGCTGAAG
AAGATGGGCGTAAAGCTCGTAATGATAACCGGCGATAACCCGGTGACGGCGGAGGCTATTGCTAGGGAAGTGGGCATAAA
GCACTACGTGGCCCGCGCGAAGCCCGAGGACAAGCTGAGGAGAGTAGAGGAGGAGCAACTGGAGGGGCACGTGGTAGCCG
TGCTGGGAGACGGCACGAACGATGCCCCCGCGCTCGCCAAGGCGGACGTCGGCATAGCGATGAACAGCGGTACGCGGGCA
GCCAAGGAGGCGGCGAACATGATAGACCTGGACTCCGACCCCACCAAGGTGGTGAGGGTAGTCGAGGTGGGCAGAGAACT
GCAGACGACGAGGGGGGCGATAACGACCTTCAGCATAATGAACGATATCGCCAAGTACTTCACCATCTTCCCGATGATCG
TCGCCCGGAGCTTCCCCCAGCTCTCCTGGCTGAACTTCATGGGGCTCCACAGCCCCGAGTCCGCGATACTAGCAACGATG
ATATTCAACGCCGTCATAATACCGTCGCTCATACCGCTGGCGCTGAGAGGTGCAGGCTTCAAGGTAGCCTCCTACAGCGA
GCTACTAGCCAGGAACCTCCTCGTCTACGGGCTCGGAGGAGTCGTGACGCCGTTCGTAGCGATAAAGCTTATCGACGTGC
TACTAGTATACCTCGGGGTGGGATAG

Protein sequence :
MPPDVKIQWTSVLWESAKKLNPAYLFGENPIMFVVELGAFFTAVYATLEGLREGAASALHVQLLVILLATVWFSTLSESI
SEHQARARVDYLRSLEKDVVAHKLVGDRVVDVRSSELVPGDVVVVGEGEYVPRDGYVLEGIAYVDESMLTGESEPVEKKK
DDRVIGGTRVVRGRIRVEIVAEPGKSYIDRLMALIQTAKRPKMKSEVMLSILLGGLSLTFLVITASLYFALRSVGGWADP
VLAVAFLVALMPTTIGGLLPAIGVAGVTRLMAENIVAKSGKAVEAAGDVDVIVFDKTGTITEGSRSAVAFIPLKNYTERD
VAVAAYLASVGDRTHEGISIIELAKSKGYVPEDLLVNEALSARKISFDVRTRFSGVEFSWYRRKSPFAGTVTPLSEVSRR
ILEARERGERVTVIKGSVDSVLEVVREDRATREAIARIVEEVGRRGETPLLVALNDEAVGVVVLKDRIKEGVKEKIRRLK
KMGVKLVMITGDNPVTAEAIAREVGIKHYVARAKPEDKLRRVEEEQLEGHVVAVLGDGTNDAPALAKADVGIAMNSGTRA
AKEAANMIDLDSDPTKVVRVVEVGRELQTTRGAITTFSIMNDIAKYFTIFPMIVARSFPQLSWLNFMGLHSPESAILATM
IFNAVIIPSLIPLALRGAGFKVASYSELLARNLLVYGLGGVVTPFVAIKLIDVLLVYLGVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-104 44
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-103 43
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-103 43
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-103 43
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-103 43
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-103 43
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 5e-99 41
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 6e-99 41