Gene Information

Name : Noca_4954 (Noca_4954)
Accession : YP_919396.1
Strain :
Genome accession: NC_008697
Putative virulence/resistance : Resistance
Product : regulatory protein, MerR
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 287701 - 288132 bp
Length : 432 bp
Strand : +
Note : PFAM: regulatory protein, MerR; KEGG: nfa:pnf2580 putative transcriptional regulator

DNA sequence :
ATGACTGCTGGACTGCGCGCCGGGCAGGTCGCCGACGCGGTCGGGGTGAACGTGGAGACGCTGCGTTACTACGAGCGTCG
CGGGATCATCGCTGAGCCCGATCGAAGCCCTGGCGGGCACCGCCTCTACCCCGAGACGACCGTGACCACGTTGCGGGTGA
TCAAGGCGGCACAGAGTCTGGGCTTCACCCTCGACGAGGTCGCGGACCTGCTCGAGGCCGGCCGGCACCACCACGGTTCC
GGCTTGCAGTCGCGGACCGAGGCCAAGCTCGCCGAGGTCGACCAGAAGATCGCCGACCTGAAGGTGATCCGAGCCAGCCT
GGTCGCAGCACGTGACGCGGGCTGTGACGACCTGGTGCAGTGCGCCGAGTCGGACTGCTGTCCCATCCCCTTCGTCCAGA
TCGGCACACGACCGGAAACGAGCAACGCATGA

Protein sequence :
MTAGLRAGQVADAVGVNVETLRYYERRGIIAEPDRSPGGHRLYPETTVTTLRVIKAAQSLGFTLDEVADLLEAGRHHHGS
GLQSRTEAKLAEVDQKIADLKVIRASLVAARDAGCDDLVQCAESDCCPIPFVQIGTRPETSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 7e-17 49
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 1e-16 49
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 8e-22 45
merR AGK07025.1 MerR Not tested SGI1 Protein 1e-15 45
merR AGK07083.1 MerR Not tested SGI1 Protein 1e-15 45
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 3e-17 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0687 Protein 2e-16 47
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0232 Protein 2e-16 47
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0684 Protein 1e-16 46
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0686 Protein 1e-16 45
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0683 Protein 2e-16 45
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0688 Protein 6e-17 44
Noca_4954 YP_919396.1 regulatory protein, MerR BAC0682 Protein 2e-17 41