Gene Information

Name : Noca_4896 (Noca_4896)
Accession : YP_919341.1
Strain :
Genome accession: NC_008697
Putative virulence/resistance : Unknown
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 228473 - 229120 bp
Length : 648 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO3640 putative two-component system regulator

DNA sequence :
ATGAGCGTCCTCCGCGTGGTTGTCGTCGACGACCAGCCCCTGGTTCGAGCAGGTCTGGCCCGGATCATCGAGGCGGACCC
GAGCATCGAGCTCGTCGGCGAGGCCGGGGACGGGCAGACTGCGATGGCGCTGGTACTCAGGCTTGAGCCAGAAATCGTCC
TGATGGATGTCCGGATGCCCCTCCTCGACGGGATCGCCGCGACGCGGAAGCTCCACGAGGCGCAGAGCTCAGCGCGCATC
ATCGTGCTCACCACGTTCGGGCTCGACGACTACGTCATCGGCGCCCTGAGAGCCGGAGCGCATGGGTTCGTGCTCAAGGA
CGCGCCGCCCGAGCGGCTGTTGGAGGCCATCCACGAGGTCGGCGCCGGGCGAGGAGTCATCGACCCAGCAGTCACACTCC
CGGTGATCAGGGCGCTGGGCACCAGAGAACTGCGCCCCGAGGTCGCCGCCCGACTGGCCGACCTGACCAGCAGGGAGCGC
GACGTGCTGGTTCTTCTCGCGCAGGGGCACTCGAACGCCGAGATCGCCGCGAGACTCGTCGTGGGTGAAGGGACTGTGAA
GACCCACGTCGCGCACGTGCTGGCCAAGCTCGGGGTCCGCGACCGGCTCCAAGCCGTCGTCTCGGCGTTCAACGCCGGCG
TCGTCTGA

Protein sequence :
MSVLRVVVVDDQPLVRAGLARIIEADPSIELVGEAGDGQTAMALVLRLEPEIVLMDVRMPLLDGIAATRKLHEAQSSARI
IVLTTFGLDDYVIGALRAGAHGFVLKDAPPERLLEAIHEVGAGRGVIDPAVTLPVIRALGTRELRPEVAARLADLTSRER
DVLVLLAQGHSNAEIAARLVVGEGTVKTHVAHVLAKLGVRDRLQAVVSAFNAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 3e-30 44
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 2e-29 41
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 3e-29 41