Gene Information

Name : Pden_5069 (Pden_5069)
Accession : YP_918825.1
Strain :
Genome accession: NC_008688
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 581257 - 582414 bp
Length : 1158 bp
Strand : +
Note : KEGG: nwi:Nwi_0592 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes

DNA sequence : 
ATGGCAGGGGATGAACCGCGCGACCGCACCATCGCGGCGGCCAACGGCGTGGGCGGCCGCGATCCCTTTGGCGCCATCGT
GCCACCGATCTATCTCAGCACCAGCTATGCCTTTGCCGGCTTCGACCGGACGCGCGGCTATGACTATACCCGCGCCGGCA
ATCCCAGCCGCGACCTGCTGGCCGAGACGCTGGCCGGGCTGGAGCATGGCGCGGGCGCCGTCGTCACCTCGTCGGGCATG
GCGGCGCTGGACCTGCTGCTTGCGCAGGTGCTGCCGGGCGGGCTGATCGTCGCGCCGCATGACTGCTATGGCGGCACGCA
AAGGCTGCTGACGGCGCGGCGCGACCGCGGCGCCTTTCGGCTGGCGCTGGTCGATCCTGGCGATCCGGCCGCCATGACCG
CGGCGCTGGCCGAGCGCCCGGCGCTTCTGCTGATCGAGACGCCCAGCAACCCGCTGATGCGGGTGACGGACATCGCTGCG
CTGGCAGTGCGGGCGCACGAGGCCGGGGCAAGGGTGGCGGTGGACAACACCTTCCTGTCGCCCGCCTTGCAGCAACCCTT
GCTGCTTGGCGCGGATTTCGTGATCCATTCCACGACCAAATACCTCAACGGCCATTCCGACGTGCTGGGTGGCGCCGTGA
TTGCCGCGCGAGCCGAGGATGCCGAGGCGCTGGCGGAATGGGCCAACATCACCGGCAGCGTCGGCTCGCCCTTCGATGCC
TTCCTGACCCTGCGCGGCATCCGCACGCTTTTCGCCCGTATCGAGCAACAGCAGGCCAGCGCCATGGTGGTGGCCGAGTT
CCTGCGCGACCGGCCCGAGGTGACGGCGGTGCATTATCCCGGCCTGTCCGGGCATCCCGGCCATGCCCTTGCCGCGCGCC
AGCAGCACGGCTTCGGCGCCATGCTGAGTTTCGAATTGCAAGGCGGCCTGCCCGCCGTGCGCCGCCTCGTCGAGGCGGTG
CGGGTCTTCACCCTGGCGGATTCGCTGGGCGGGGTGGAAAGCCTGATCGCCCATCCAGCGACCATGACCCATGTCAGCAT
GGGCGCCGAGGCGCGGCACCGCGCCGGGATCGGCGATGGGCTGCTGCGCCTTTCGGTCGGGCTCGAGGATCGGCGCGACC
TGCTTGATGGGCTCGGCGCCGGTCTGGCCGCCCTCTGA

Protein sequence : 
MAGDEPRDRTIAAANGVGGRDPFGAIVPPIYLSTSYAFAGFDRTRGYDYTRAGNPSRDLLAETLAGLEHGAGAVVTSSGM
AALDLLLAQVLPGGLIVAPHDCYGGTQRLLTARRDRGAFRLALVDPGDPAAMTAALAERPALLLIETPSNPLMRVTDIAA
LAVRAHEAGARVAVDNTFLSPALQQPLLLGADFVIHSTTKYLNGHSDVLGGAVIAARAEDAEALAEWANITGSVGSPFDA
FLTLRGIRTLFARIEQQQASAMVVAEFLRDRPEVTAVHYPGLSGHPGHALAARQQHGFGAMLSFELQGGLPAVRRLVEAV
RVFTLADSLGGVESLIAHPATMTHVSMGAEARHRAGIGDGLLRLSVGLEDRRDLLDGLGAGLAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-48 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_5069 YP_918825.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 4e-50 42