|
Name : Pden_4539 (Pden_4539) Accession : YP_918298.1 Strain : Genome accession: NC_008688 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase (Reverse transcriptase) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 19602 - 20843 bp Length : 1242 bp Strand : + Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: plu:plu1111 hypothetical protein DNA sequence : ATGACAGAGGCAAAGCCGTTTACGATTGAGAAGAGAGAGGTCTGGGAGGCGTTCCGGCATGTGGACGCCAATCAGGGTGC AGCTGGTGTAGACGGGCAGACGCTCGAAAGCTTCGGGGAACGGCTTGGTCCGAACCTTTACAAGCTTTGGAACCGGATGT CCTCTGGCAGCTACATGCCATCGTCGGTACGCCGGGTGATGATCCCCAAGGCAGATGGGGGCCAACGGCCGTTGGGTATT CCGACGGTCACGGACCGCATCGCGCAGGAGGTCGTCCGGCTTTATCTGGAACCGCTCGTGGAACCAGTATTCCACAGGGA TTCCTATGGGTATCGGCCTGAACGCTCTGCCATCGACGCCATCCGGAAGGCGCGCCAGCGATGCTGGCGCTACGACTGGG TGTTGGACATGGACATCAAAGGTTTCTTCGATACCATCGATCATGAGCTCCTGCTCAAGGCAGTCCGCCATCATACGGAC TGTCGATGGGTGCTGCTTTATATCGAACGGTGGCTGAAGGCACCTGTGAGGATGGAAGATGGCAGTCTTGTCCCGCAGGA ACGCGGAACGCCGCAGGGTGGGGTGATCTCGCCGCTGCTGGCCAACCTGTTCCTGCACTACGCTTTCGACAGATGGCTGG ATCGAGAGAACCCGCAAGTGCCGTTCGAGCGCTATGCGGATGACATCATTTGTCATTGTCGGACGGAAGATGAAGCTCGC AGGCTGTGGCAGCAGGTCGAAAACCGGCTCGCCGGATGCGGTCTGACACTTCATCCGCAGAAGACAAAGATCGTCTACTG CAAGGACACGAACCGAAAGGGTTCCTTCCCGACGGTTGCTTTCGACTTTCTCGGCTACAGGTTCCAGCCCCGGCTGGCGA TCTGGCGCGGAGGTTTGTTTGGCGTATCCTATCTTCCGGCGGCCAGCCCCAAAGCCCTGAAGTCGTTCCGACGCCGGGTG CGCAACTGGGGATTGCAGCGGCGCAGCGACAAGGGGCTGATCGATCTGGCCCGCATGTTCAATCGACAGATTGAGGGGTG GATCGGCTACTTCAGATGCTTCTACAAATCGGCGCTCTATTCGACACTACGTCTGATCGACGCTCATTTGGTCCGTTGGG TGATGCGGAAGTATAAACGCTTCAAGCAACGACCCCGGCAAGCGCGGCTCTGGCTCGCCAGAATTGCGAAATCTACGCCG GGATTGTTCACCCACTGGTCTCTTCTTTACGCAAATGGCTGA Protein sequence : MTEAKPFTIEKREVWEAFRHVDANQGAAGVDGQTLESFGERLGPNLYKLWNRMSSGSYMPSSVRRVMIPKADGGQRPLGI PTVTDRIAQEVVRLYLEPLVEPVFHRDSYGYRPERSAIDAIRKARQRCWRYDWVLDMDIKGFFDTIDHELLLKAVRHHTD CRWVLLYIERWLKAPVRMEDGSLVPQERGTPQGGVISPLLANLFLHYAFDRWLDRENPQVPFERYADDIICHCRTEDEAR RLWQQVENRLAGCGLTLHPQKTKIVYCKDTNRKGSFPTVAFDFLGYRFQPRLAIWRGGLFGVSYLPAASPKALKSFRRRV RNWGLQRRSDKGLIDLARMFNRQIEGWIGYFRCFYKSALYSTLRLIDAHLVRWVMRKYKRFKQRPRQARLWLARIAKSTP GLFTHWSLLYANG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 3e-115 | 53 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 5e-88 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pden_4539 | YP_918298.1 | RNA-directed DNA polymerase (Reverse transcriptase) | VFG1512 | Protein | 3e-88 | 46 |
