Gene Information

Name : Pden_3803 (Pden_3803)
Accession : YP_917565.1
Strain :
Genome accession: NC_008687
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 939693 - 941363 bp
Length : 1671 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: bja:blr5600 ABC transporter ATP-binding protein

DNA sequence :
ATGGCCGATCACGCCAATGCCGCCCAGCCGGTGCTGTCGATCCGCGACCTGCGCGTCTCGACCTGCGGCCGCGAGCCGGT
CGAGATCCTCAAGGGCATCGGCTTCGACATCGCGCCGGGCGAGACGGTCTGCCTGGTCGGCGAATCCGGCTCGGGCAAGT
CCGTGACCTCGCTGGTGACCATGGACCTGCTGCCTCAGGGCGAGCTGCGCGCGACCGCCGGCTCGGTCAGGCTGAACGGA
GAAGAGATCCTGACCGCGACGCCGGCGCGGACCAAGACGCTGCGCGGCTCGGACATGGCGATGATCTTTCAGGAGCCGAT
GACCGCGCTGAACCCGGTGCTGAAGATCGGCCTGCAGATGGACGAGGTCTATCGTGCCCACCGCCGGATGAGCCCGGCCG
AGCGGCGGCAGGCGGCGCTGGAGGTCTTTGCCTCGGTGCACCTGCCCGATCCGCCGCGCATCTATGACAGCTATCCGCAC
CAGCTGTCCGGCGGCCAGCGCCAGCGGGTGATGATCGCCATGGCGCTGGCGCTGAAGCCCCGGCTGCTGATCGCCGACGA
GCCGACGACCGCGCTGGACGTGACCACCCAGAAGCAGATCCTGAGCCTGATCCGCGAATTGCAGGAGCAGCAGAATACCG
CCGTGCTGTTCATCACCCACGACATGGGGGTGGTGGCCGATATCGCAGACCGCGTCTGCGTCATGCGCCATGGCGAGATG
GTCGAGGCCGGCCCGGTCGGGCAGGTGCTGAGCCACCCCACCCAGCCCTATACCCAGGCGCTGCTGCGCGCCGTGCCCTC
GCTGGTCCCGCGCGCGCCGCGTCCCGAGGCGGCCGGCCCGCCCGCCATCGAGGTCAGCGCGCTTGAGAAGGTCTTCCAGA
TCGGCTCGCTGCCGGCGCAATTGCTGGGCCGAGCGCCGCATCGCGTCCATGCGGTGGACCGGGTCAGCTTTCGGTTGGCG
CAGGGCCGCACGCTGGGCATCGTCGGCGAAAGCGGCTCGGGCAAGTCCACGGTGGCGCGTTGCGTGCTGCGGCTGGAGGA
TCCCAGCGGCGGCGAGATCCGCGTCGGCGGCCAGGACATCGCCCGCTTGCGAGGCGCCAGGGCGCTGGCCCCGGCGCGGC
GTCGGGTGCAGATGGTGTTCCAGGATCCCAACCGCTCGCTGAACCCGCGGCTGCGCATTGCCGAAAGCATGATCGAGGGG
CCGCTGAACATGGGCGAAAGCCGTGCCTCGGCGCTGGAACGCGCGGGCGAGCTGATCGAGGTCGTCGGCTTGCCGCGCGC
CAGCCTGCGGCGCTTTCCGCACCAGTTCTCGGGCGGGCAGCGCCAGCGCATCGCCATCGCCCGCGCGCTGATGATGGACC
CCGAGGTGATCGTGGCGGACGAGGCGGTCTCGGCTCTGGACGTCTCGGTTCAGGCGCAGGTGCTGGACCTGCTGGCCGAA
TTGCAGGCCAAGCGCGATCTGGCCATCCTGTTCATCACCCACGACCTGCGCGTCGCCGCCCAGATCTGCGACGAGGTGAT
GGTGATGCGGCGCGGTTCGGTGGTCGAGCATGGCCCGGCGGCCGAGGTGCTGGCCCATCCGCGCCACGACTATACCCGCG
CGCTGATTGCCGCCGCACCCGGCCGCGACTGGGATTTTTCCACGGGCCGCCGGATCGAGGTGCCGGCATGA

Protein sequence :
MADHANAAQPVLSIRDLRVSTCGREPVEILKGIGFDIAPGETVCLVGESGSGKSVTSLVTMDLLPQGELRATAGSVRLNG
EEILTATPARTKTLRGSDMAMIFQEPMTALNPVLKIGLQMDEVYRAHRRMSPAERRQAALEVFASVHLPDPPRIYDSYPH
QLSGGQRQRVMIAMALALKPRLLIADEPTTALDVTTQKQILSLIRELQEQQNTAVLFITHDMGVVADIADRVCVMRHGEM
VEAGPVGQVLSHPTQPYTQALLRAVPSLVPRAPRPEAAGPPAIEVSALEKVFQIGSLPAQLLGRAPHRVHAVDRVSFRLA
QGRTLGIVGESGSGKSTVARCVLRLEDPSGGEIRVGGQDIARLRGARALAPARRRVQMVFQDPNRSLNPRLRIAESMIEG
PLNMGESRASALERAGELIEVVGLPRASLRRFPHQFSGGQRQRIAIARALMMDPEVIVADEAVSALDVSVQAQVLDLLAE
LQAKRDLAILFITHDLRVAAQICDEVMVMRRGSVVEHGPAAEVLAHPRHDYTRALIAAAPGRDWDFSTGRRIEVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-98 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-82 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-82 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-82 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-82 43