Gene Information

Name : Pden_3593 (Pden_3593)
Accession : YP_917357.1
Strain :
Genome accession: NC_008687
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 743455 - 744669 bp
Length : 1215 bp
Strand : -
Note : PFAM: transposase IS66; KEGG: mag:amb3320 transposase and inactivated derivative

DNA sequence :
ATGCCTGTGCCGATTGCGGCGGCCGCCTGCGCCGGATCGGCGAGGATGGTGAGGCACGAGCCCGCCACCGGTCCGAGGGC
CGTGCCGAACGAAGAGCTGGAGTATGTGCCGGGCCGCTTCATCGTGAACCGTATTGTCCGGCCCCGCCAGACCTGCACCT
GCTGCGAACGGTTCGTGCAGGCCCCGCTGCCCTCGCGCCCCATCGAACGCGGGCGCCCTGGGCCGGGTCTCCTGACCCAT
GTGCTGGTCAGCAAGTATGCGGATCATCTTCCGTTGTATCGTCAGAGCCAGATCTTCGACCGCGAAGGGCTCGATCTTGA
CCGTTCCACGCTGGCCGACTGGGTTGGCAAGTCCACCGCCCTCCTGGAACCCTTGGCCGAGGCCATCGGTCGCCATGTCC
TGTCGGCCGAGGCGATCTTTGCCGATGACACGCCTGTCAGTATGCTGGCGCCCGGCACCGGCAAGACACAGACCGCGCGG
CTCTGGACCTACGCCCGCGACGAACGCCCCTGGGGTGGCGATACCCCACCGGCCGCTTGGTATCGGTTCTCCGGCGACCG
CAAGGGTCAGCACCCCAAGGATCACCTCGCCCGATACCGCGGCTGGATGCATGCCGACGGCTATGCCGGGTTTGAGGACT
TGTATCGCTCCGGTTCAATCCGCGAGGTCGCCTGCATGGCGCATGTGCGGCGCAAGTTCGTCGACATCCACCGGTCGCAA
GGCTCCCCGATCGCCGAAGAGGCCATCGGCCGGATCGCGCAACTCTACGCCGTCGAGAAAGAGGCCCGAGGTTCGCCACC
TGATCGTCGAGCCGAGCTGCGACAAGCCCATTCCGCCCCGATCTTCGACAATCTGGAGCGCTGGCTCGCCCTGCAACTCA
CCACGGTCTCAGGCAAATCCCCGCTTGCTTCGGCCATCCGCTATGCCCTGGCCCGCATGGAACGCATGCGCCCCTATCTC
GACCACGGCATCCTCGAACTGGACAACAACGTCGCCGAACGAGGCGTGCGTGCTGTCGCCCTCGGCCGCAAGAACTACCT
CTTCGTCGGCTCCGAAGCAGGCGGCAAGGCCGCCGCCATCACCTATACGCTGATCGAAACGGCCAAGCTCAACGCCATTG
ATCCCCACGCCTGGCTCGCCGACACCCTGGCCCGCATCCCAGACTACAAGATCACAAAGGTCGATGACCTGCTGCCTTGG
AAATGGCGCGGGTAG

Protein sequence :
MPVPIAAAACAGSARMVRHEPATGPRAVPNEELEYVPGRFIVNRIVRPRQTCTCCERFVQAPLPSRPIERGRPGPGLLTH
VLVSKYADHLPLYRQSQIFDREGLDLDRSTLADWVGKSTALLEPLAEAIGRHVLSAEAIFADDTPVSMLAPGTGKTQTAR
LWTYARDERPWGGDTPPAAWYRFSGDRKGQHPKDHLARYRGWMHADGYAGFEDLYRSGSIREVACMAHVRRKFVDIHRSQ
GSPIAEEAIGRIAQLYAVEKEARGSPPDRRAELRQAHSAPIFDNLERWLALQLTTVSGKSPLASAIRYALARMERMRPYL
DHGILELDNNVAERGVRAVALGRKNYLFVGSEAGGKAAAITYTLIETAKLNAIDPHAWLADTLARIPDYKITKVDDLLPW
KWRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-85 51
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-88 50
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 5e-95 50
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 5e-88 49
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 2e-71 48
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-85 48
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-87 47
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 6e-86 47
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 5e-88 47
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-87 47
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-88 47
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-87 47
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 7e-88 47
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-88 47
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-88 47
tnp AEA34686.1 transposase Not tested Not named Protein 1e-88 47
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-88 47
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 1e-62 46
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 1e-60 46
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-83 46
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-83 46
RS12 AAP82957.1 transposase Not tested PAPI-2 Protein 1e-54 44
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-65 44
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 1e-66 43
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 3e-70 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_3593 YP_917357.1 transposase IS66 VFG1700 Protein 3e-85 51
Pden_3593 YP_917357.1 transposase IS66 VFG1513 Protein 9e-72 48
Pden_3593 YP_917357.1 transposase IS66 VFG0793 Protein 9e-89 47
Pden_3593 YP_917357.1 transposase IS66 VFG0634 Protein 4e-61 46
Pden_3593 YP_917357.1 transposase IS66 VFG1051 Protein 8e-66 44