Gene Information

Name : Pden_3529 (Pden_3529)
Accession : YP_917295.1
Strain :
Genome accession: NC_008687
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 679749 - 680531 bp
Length : 783 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_10180 ferric enterobactin transport protein FepC

DNA sequence : 
ATGTCCCATCGCCTGCATGCCGACGCCGTGACGCTGCGCTATCAGGCGCGGGTGATCTCGCAAGACCTGTCGCTGGCGAT
CCCGGACGGCTCGTTCACCGCCATCGTCGGGCCGAACGCCTGCGGCAAGTCCACCCTGCTGCGGGCGCTGTCGCGGCTGC
TGGTCCCCGATGCGGGACAGGTGGTGCTGGACGGCAAGGCGATCTCGGCGCTTCCCAGCCGCGAGGTCGCCCGCAAGCTG
GGCCTGCTGCCGCAATCGCCGGTGGCGCCGGACGGGTTGACGGTGGCCGAACTGGTGGCGCGCGGCCGTTTCCCGCATCA
AAGCTTCCTGCGGCAATGGTCGCCGGACGACGAGCGCGCGGTGCGCTCCGCGCTGGAGGCGACGGGCACCCTGCCCCTGG
CCGAGCGCCCGGTGGCCGAGCTGTCGGGCGGCCAGCGCCAGCGGGTCTGGATCGCCATGACGCTGGCGCAGGAAACCGAC
ATCCTGCTGCTGGACGAGCCCACGACATTCCTGGACATCGTGCATCAGGTCGAGCTGCTGGAACTGCTCGCCGGCCTGAA
TGCGCAGGGGCGGACCGTCGTCGCGGTGCTGCACGAACTGAACCTGGCCTTTCGCTATGCCTCGCATCTGGTGGCGATGT
GCGAGGGCGCGGTGGTTGCCGAGGGCGCGCCGGAAACCATCGTCACCGACCAGTTGATGCGGCAGGTGTTCGGGCTTGAT
GCGCTGGTGCAGCCCGATCCGCTGACCGGCCGGCCGATGGTGATTCCCCGGCCGCGCCGATGA

Protein sequence : 
MSHRLHADAVTLRYQARVISQDLSLAIPDGSFTAIVGPNACGKSTLLRALSRLLVPDAGQVVLDGKAISALPSREVARKL
GLLPQSPVAPDGLTVAELVARGRFPHQSFLRQWSPDDERAVRSALEATGTLPLAERPVAELSGGQRQRVWIAMTLAQETD
ILLLDEPTTFLDIVHQVELLELLAGLNAQGRTVVAVLHELNLAFRYASHLVAMCEGAVVAEGAPETIVTDQLMRQVFGLD
ALVQPDPLTGRPMVIPRPRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-66 55
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-66 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-66 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-66 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-66 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-58 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-52 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-58 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-58 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-52 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-52 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-52 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-52 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_3529 YP_917295.1 ABC transporter BAC0164 Protein 3e-58 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_3529 YP_917295.1 ABC transporter VFG0925 Protein 2e-69 56
Pden_3529 YP_917295.1 ABC transporter VFG1042 Protein 3e-58 49