Gene Information

Name : Pden_3525 (Pden_3525)
Accession : YP_917291.1
Strain :
Genome accession: NC_008687
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 674203 - 675066 bp
Length : 864 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit

DNA sequence : 
GTGACCGCCGACCACCGACTGATCGCCGAGCATCTGACCGCCGGCTATGGCGATGCCGCCATCCTGCGCGACCTGGACCT
TGCCGTCGCGCCGGGCCGGATCACCGCCATCGTCGGGGCCAATGCCTGCGGCAAGTCCACGCTGCTGCGCAGCCTGTCGC
GGCTGCTTGCCCCCGCGCAGGGGCAGGTGACCCTGGACGGCCGCGCCATCCACCGCATTCCCGCGCGCGAACTGGCCCGC
ACGCTCGGTCTCTTGCCGCAGTCGCCCATCGCGCCCGAGGGCATCACCGTGGCCGAGCTGGTCGGCCGCGGCCGGCATCC
GCATCACGGGCTGATGACGCGCTGGAGCGCCGAGGACGACCGCGCCGTCGCCGCCGCGCTGGATGCGACCCAGACCGCCG
AGCTGGCCGAGCGCCCGGTGGACGAGCTTTCCGGCGGCCAGCGCCAGCGCGTCTGGATCGCCATGGCGCTGGCGCAGCAG
ACCGGCATCCTGCTGCTGGACGAGCCGACGACGTTCCTGGACGTCAGCCACCAGGTCGAGGTGCTGGACCTGCTGGTCGA
TCTGAACATGACGCGCGGCACCACCATCGTCATGGTGCTGCACGACCTGAACCTGGCGGCGCGCTATGCCGATCTGCTGG
TGGCGATGCGCGAGGGCCGGCTCTACGCCTCGGGTCCGCCCGAGGAGGTGCTGACCGCCGGCACCCTGCGCGCCGTCTTT
GGGCTGGACAGCCGCGTGGTGACCGATCCCATTTCGGGCAAGCCGATGATGCTGCCCATAGGTCGGCACCGTGTCGGGAC
AAGCGGCCCGACCGCCGCATCGGCCATGCCGGAAGGCACCTTGCACGACGACCCGATGCGCTAG

Protein sequence : 
MTADHRLIAEHLTAGYGDAAILRDLDLAVAPGRITAIVGANACGKSTLLRSLSRLLAPAQGQVTLDGRAIHRIPARELAR
TLGLLPQSPIAPEGITVAELVGRGRHPHHGLMTRWSAEDDRAVAAALDATQTAELAERPVDELSGGQRQRVWIAMALAQQ
TGILLLDEPTTFLDVSHQVEVLDLLVDLNMTRGTTIVMVLHDLNLAARYADLLVAMREGRLYASGPPEEVLTAGTLRAVF
GLDSRVVTDPISGKPMMLPIGRHRVGTSGPTAASAMPEGTLHDDPMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-60 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-49 52
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-59 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-59 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-46 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-46 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-46 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-46 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_3525 YP_917291.1 ABC transporter BAC0164 Protein 6e-49 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_3525 YP_917291.1 ABC transporter VFG0925 Protein 4e-58 53
Pden_3525 YP_917291.1 ABC transporter VFG1042 Protein 5e-49 52