Gene Information

Name : Pden_3017 (Pden_3017)
Accession : YP_916796.1
Strain :
Genome accession: NC_008687
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 194271 - 196073 bp
Length : 1803 bp
Strand : +
Note : PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: eci:UTI89_C2181 inner membrane ABC-transporter

DNA sequence : 
ATGAGAGCTGCCAGCCATGCCGCAAGGCCCGAGCGCGGGGATGACGACGACCGGGCCTGGGCCATCATGGAACCCGTGCG
TCGCCAGATCCGCCTTGCGATGGGGTTGGGCGCGGTTTCGGGACTGGCGGTCCTTGCCACGATGATCTGCCTGGCGATGA
CGGTCCTGGCGCTGCGCGATCATCCGGGCCAGGTGCCGTGGGTCTGGATGCTGGGTGCTTTGGCGGGGACGGTCGCCAGC
TATCTGGCCCGGCTGGGTGCGTTCAACCAGTCCCACTATGCTGCCTTCCGGCTGGAGCGTATCCTGCGAAGCCGTCTGGC
CGAACGGATGGCCGAGGTTCCCCTGGGCTATATCCAGGCCCTGGGCGCCGGCGGGCTGACCAAGGTGATCCACGACGACG
TCAAGGCCTTGCACGTCTTCGTCGCCGACAGCACGCCGCTTTATGCCCGCGCCTATGTCACGCCGCTGGCCACGGCGGCG
ATCCTGTTCTGGCTCGACTGGCGGTTGGCGCTGGCGGTGCTGGCGGTTCTGGGCCTGGGCATCCTGTCGATGCGCGGCGC
GCAGAAGCGCCGGCGCAACATGGCGCGGCTGTACAACGAGGCGCGCGAGAAGGTCAGCGCAGCGGTGGTCGAGTTCGTGC
AGGCGATGCCGGTGGTGCGCAATTTCGACACCGGCCATTCCAGCTTTGGCCGGTATCAGCAGGCGCTCGACGCCTATCTG
GCGGTGCTGGCGCGGTGGTATCGTGACTCGGGCCGTTCGGTCCGCATGACCTGGGCGATCCTCAGCCCGCTTCCGACGCT
GGCCGTCGTGCTGTGGCTGGGGCTCTGGCAGGTCCGGGAGGGCGAGCTGGACGCGGTGCGGTGGCTGGCAATTCTTCTGC
TATGCACCGGAATGGCCGAATCGGTCATGCCGATGATGATGCTGCGCCACATGATCGACAAGGTGCGGCTGTCGATCGCG
CGCATCCATGACGTGCTGGCCGCGCCGCTGTTGCCGGTCCCGGCGCAGGGCCACTCGCGCCGGCCGGCGGATTCCGGCGT
GGTCTTCGACGATGTGAGCTTTCGCTATGGCCCCGACGAGACCGAGGCGCTGCGCCATGTCAGCTTCGTTGCCGTACCCG
GCAGCGTGACGGCGCTGGTCGGGCCGTCCGGCGCGGGCAAAAGCACCGTTGCGCGGCTGATCCCGCGGTTCTGGGACGTG
ACCGGCGGCCGCATCCTGATCGGCGGGGTCGATATTCGCGACATGGGCGCCGACGACCTGATGCGGCAGGTGGCCTTCGT
CTTTCAGGATACCTTCCTGTTTTCCGACAGCATCGCCGAGAATATCAGGCTCGGTTGTCCCGATGCGACCGATGAGGAGG
TGATCGCCGCGGCCCGCGCCGCGCAGGCGCATGATTTCATCGCGGCGCTCCCCCAGGGTTACGACACGCCGGCCGGCGAG
CGGGGCGCGCTGCTGTCGGGCGGCCAGCGGCAGCGCATCACCATCGCCCGTGCGATCCTGCAGAACCGGCCCGTCCTTGT
CCTGGACGAAGCGACGGCCTTTGCAGATCCGGAAAACGAGGCCGCGCTGATCCGTGCGCTTGGCGAACTCACCCGTGGCA
AGACGGTGATCACGGTCACCCACCGCCTGCAAAGCGTCGTCCATGCCGACCAGATCCTGGTCTTCGATGCGGGCCGGCTT
GTCCAGGCGGGTCGCCACCACGACCTGCTGGCACAGCCGGGGCGCTATGCACGGCTTTGGGCCAGCCATGCCGAGGCGCA
GGCCTGGACCCTGGGACACATGAGGAAGGGAGCCGCCGAATGA

Protein sequence : 
MRAASHAARPERGDDDDRAWAIMEPVRRQIRLAMGLGAVSGLAVLATMICLAMTVLALRDHPGQVPWVWMLGALAGTVAS
YLARLGAFNQSHYAAFRLERILRSRLAERMAEVPLGYIQALGAGGLTKVIHDDVKALHVFVADSTPLYARAYVTPLATAA
ILFWLDWRLALAVLAVLGLGILSMRGAQKRRRNMARLYNEAREKVSAAVVEFVQAMPVVRNFDTGHSSFGRYQQALDAYL
AVLARWYRDSGRSVRMTWAILSPLPTLAVVLWLGLWQVREGELDAVRWLAILLLCTGMAESVMPMMMLRHMIDKVRLSIA
RIHDVLAAPLLPVPAQGHSRRPADSGVVFDDVSFRYGPDETEALRHVSFVAVPGSVTALVGPSGAGKSTVARLIPRFWDV
TGGRILIGGVDIRDMGADDLMRQVAFVFQDTFLFSDSIAENIRLGCPDATDEEVIAAARAAQAHDFIAALPQGYDTPAGE
RGALLSGGQRQRITIARAILQNRPVLVLDEATAFADPENEAALIRALGELTRGKTVITVTHRLQSVVHADQILVFDAGRL
VQAGRHHDLLAQPGRYARLWASHAEAQAWTLGHMRKGAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 1e-134 57
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 9e-134 56
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 9e-134 56
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 8e-134 56
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 2e-134 56
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 3e-133 56
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 1e-133 56
ybtP CAA21388.1 - Virulence HPI Protein 1e-133 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_3017 YP_916796.1 ABC transporter BAC0432 Protein 5e-134 56