Gene Information

Name : Pden_0609 (Pden_0609)
Accession : YP_914417.1
Strain :
Genome accession: NC_008686
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 584724 - 586553 bp
Length : 1830 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: sil:SPO2813 peptide/nickel/opine uptake family ABC transporter, ATP-binding protein

DNA sequence :
ATGCTGGACACGAAGCCGCTGGTCAGGATCGAGGGGTTGCGGGTCGAGTTCCAGACCCATGACGGCCCGGTCACGGGCGT
CGAGGATCTGTCCTTCGACATCCGGCCCGGCGAATGCCTTTGCGTGGTGGGCGAATCCGGCTCGGGCAAATCGGTCAGTT
CGCTGTCGCTGATGCGGCTGGTGGAATTCGGCGGCGGCGAGATCGCCAATGGCCGGCTGCTGTTCCAGCGCGAGCGGGAC
GAGATCGACCTCGCCAAGGCCCCGCCCGCCGCGATGCGCGACATTCGCGGCAACGAGATCGCGATGATCTTCCAGGAGCC
GATGACGGCGCTGAACCCGGTCTTTACCGTGGGCGAGCAGCTGGCCGAGGGGCTGATCGTGCATCGCGGCCTGACGCGCG
CCCAGGCCCGCGCCCGCGCGCCGGAGCTGTTGCACGAGGTGCGCATCCCCGAACCCGAGCGGCGGTTGCGGCAGTATCCG
CACGAGCTTTCGGGCGGGATGCGCCAGCGCGTCGTCATCGCCATGGCGATGGCTTGCCGCCCGCGCCTGCTGATCTGCGA
CGAGCCGACCACGGCGCTGGACGTGACCATCCAGGCCGAGATCCTGACCCTGATCGACCGCCTGAAGCGCGAGACCGGCA
TGGCGGTGCTGTTCATCACCCATGACATGGCGGTGGTGGCGCAGATGGCCGACCGCGTCGTGGTCATGTTCCGCGGCAAC
AAGGTCGAGGAAGGCCCGGTCGGCCAGATCTTCGAAGCCCCGCGCGAGCCTTATACCCAGGCGCTGCTTGCCGCCGTGCC
GCGGCTGGGCGAGATGACCGGGCGCGATGCGCCCGAGCCGATGCGGCTGATGCGCGAGGGGCAGGTGGCGCGGCCCGAGC
CCGTGATCCCGCCTGCGCCCGCGCCGCTGCTGGTGGTCAGGAACCTTTGCACCCGCTTTGCGGTCAAGGGCGGCATCCTG
CGCCGCACCGTGGCGCAGGTCCATGCGGTCGAGGACGTCTCCTTTACCGTCAATGCCGGCGAGACCCTGTCGCTGGTGGG
CGAATCGGGCTGCGGCAAGTCCACCACCGGACGCTCGATCCTGCGGCTGGTCGAGCCGAGTTCGGGCCAGGTCAGCCTTG
GCGGGCGCGACATCCTGGCCCTGGGTGCATCTGATCTGCGCAAGGCGCGGCGCGACATGCAGATGATCTTCCAGGACCCG
TTCGCCAGCCTCGACCCGCAGATGCGCCTGCTCGACCAGATCGAGGAGCCGATGCTGAACTACGGCATCGGCAACCGCGT
CGAGCGCCGAGACCGCATCGCCCGGCTTTTCGACCGGGTGGAACTGCCGCGCGGCTTCATGAAGCGTTACCCGCACGAGC
TGTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGCCCTGGCGCTGAACCCGAAGCTCATCATCGCCGACGAGGCG
GTCTCGGCGCTGGACGTTTCGGTGCAGGCGCAGGTGCTGAACCTGCTGATGGAATTGCAGCGCGACCTTGGCATCTCGAT
GCTGTTCATCAGCCATGACATGGCGGTGGTCGAGCGCGTCAGCCATCATGTCGGCGTCATGTATCTGGGCCGCATCGTCG
AGATCGGCACCCGCAGGCAGGTCTTCGAGAACCCGCAGCACGGCTATACCCGCCAGTTGATGGCCGCCGTGCCGGTCGCC
GATCCGCGCCGCCGCAAGATCGGCGAGGACCTGCGCTTTCGTCCCATCCCCTCGCCGATCCATCCCGTCGGCCATGTGCC
CGCGCCCTCGGTCTATCGCGAGGTGGCGCCCGGCCATCTGGTGCTGGCCGAGCCGGCGACGCATGGATAA

Protein sequence :
MLDTKPLVRIEGLRVEFQTHDGPVTGVEDLSFDIRPGECLCVVGESGSGKSVSSLSLMRLVEFGGGEIANGRLLFQRERD
EIDLAKAPPAAMRDIRGNEIAMIFQEPMTALNPVFTVGEQLAEGLIVHRGLTRAQARARAPELLHEVRIPEPERRLRQYP
HELSGGMRQRVVIAMAMACRPRLLICDEPTTALDVTIQAEILTLIDRLKRETGMAVLFITHDMAVVAQMADRVVVMFRGN
KVEEGPVGQIFEAPREPYTQALLAAVPRLGEMTGRDAPEPMRLMREGQVARPEPVIPPAPAPLLVVRNLCTRFAVKGGIL
RRTVAQVHAVEDVSFTVNAGETLSLVGESGCGKSTTGRSILRLVEPSSGQVSLGGRDILALGASDLRKARRDMQMIFQDP
FASLDPQMRLLDQIEEPMLNYGIGNRVERRDRIARLFDRVELPRGFMKRYPHELSGGQRQRIAIARALALNPKLIIADEA
VSALDVSVQAQVLNLLMELQRDLGISMLFISHDMAVVERVSHHVGVMYLGRIVEIGTRRQVFENPQHGYTRQLMAAVPVA
DPRRRKIGEDLRFRPIPSPIHPVGHVPAPSVYREVAPGHLVLAEPATHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-98 45