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Name : Pden_0461 (Pden_0461) Accession : YP_914270.1 Strain : Genome accession: NC_008686 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 431234 - 432751 bp Length : 1518 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: sme:SMc03282 transposase number 1 for insertion sequence ISRM27 DNA sequence : GTGCCGGGTCGCCATGTAACCGATCATCAGACGAGGCTTTTCATGAAGCTGAGACAAGACCATCCCATTGAGACCGCCGC CGCGAAGGCGGGGCTGAGCCGGTCGACGGGCTATCGGATCGTAAACGACCCGCGCCTGCCGTCGCAGAAGAAGGGAGCCC GCGGTCGCCGCCGCCCCGACCCGCTGGAGCATATTTTCGAGGCCGAGGTGGTGCCGATGTTGCAGTCGGCCCCCGGGTTG CGGCCGGTTGCCATTTACGAGGAGATGCTGCGCCGCCATCCCGAACTTCAACCGGGCATTCGCCGCACGCTGGAGCGCCG GATCCGGGCCTGGCGAGCTCTCCACGGCGAGGATCGGGAGGTCATGTTCCGACAGGTCCACGAACCTGGGCGGCTCGGCC TGTCGGACTTCACCGACATGGGCGCACTCGGCGTGACGATCACCGGGCAGCTGCTCGATCACCTGCTTTACCATTTCCGG CTGCCGTGGTCGGGGTTCGAACATGCCCATGTCATCCTGGGCGGCGAGAGCTTCGTGGCTTTGGCCGAGGGGTTGCAGAA CGCGCTGTGGTCGGCGGGCGGCGCCCCCGCCTGTCACCGCACCGACAGCCTTTCGGCCGCGTTCCGCAACCTTGACGCCG ATGCCCGGACGGACCTGACCACGCGCTACGAAGCGCTGTGCACCCAGTACCGCATGGTGCCGACGCGCAACAACAAGGGC GTGGCACATGAGAACGGGGCGATCGAAAGCGCCCATGGCCATCTCAAGGCCGCTGTCCGGGACGCACTGCTGATGCGCGG CAGCGCCGACTTCGATCACCTAGATCACTATCGCGCCTTCATCGACGAGATTGTCGGGCGCAGGAATGCGGCCAGAGGTA AGGGGATCGCGGCCGAGCGTGCCCATCTGCAGGTGCTTCCGACACGGCGCACCACCGACTTCGAGGAGGTGATCGTCACG GTGACCGGCACCGGCGGCTTCACCCTGCGCAAGGTGTTCTACACCGTGCCCTCGCGCCTGATCGGGCATCGGCTGCGGGT GCGCTTGTTCGATGACCGGCTGGAAGTCTTCACCGGCGGAACGCATCTTCTGACCCTGCCGCGCGGGCGTGCGCAGGCCA ATGGCAAGCACGATCAGGTGGTGAACTATCATCACGTCATCCATTCCCTGCGCAAGAAGCCGATGGCTCTGGCGGGCCTG GTCTATCGCGACAAGCTCTTCCCTCGACCGGAATATCGCCGGGCCTGGGAGGCGCTCAATGAGGCGTTGCCCGCCCGGCA GGCCTGCAGGATCACTGTCGAGCTTCTGGCCCTGGCCCATGATCGCGGCTGCGAGGCCGAACTGGCCGCCGAGATCGGCC GCGTCCTGCAAGACGGTGGTTTGCCCGACCTGTCCATCCTGCGCGCACGGTTCTCGCCCGATCCCGAACAGCTGCCGGTC ATCACGGTGACCTCGCCCCGGCTCAGCAGCTACGAGGCGCTGATCCGTGCCCCGGAGTTGGCGGAGGCCCGCGCATGA Protein sequence : MPGRHVTDHQTRLFMKLRQDHPIETAAAKAGLSRSTGYRIVNDPRLPSQKKGARGRRRPDPLEHIFEAEVVPMLQSAPGL RPVAIYEEMLRRHPELQPGIRRTLERRIRAWRALHGEDREVMFRQVHEPGRLGLSDFTDMGALGVTITGQLLDHLLYHFR LPWSGFEHAHVILGGESFVALAEGLQNALWSAGGAPACHRTDSLSAAFRNLDADARTDLTTRYEALCTQYRMVPTRNNKG VAHENGAIESAHGHLKAAVRDALLMRGSADFDHLDHYRAFIDEIVGRRNAARGKGIAAERAHLQVLPTRRTTDFEEVIVT VTGTGGFTLRKVFYTVPSRLIGHRLRVRLFDDRLEVFTGGTHLLTLPRGRAQANGKHDQVVNYHHVIHSLRKKPMALAGL VYRDKLFPRPEYRRAWEALNEALPARQACRITVELLALAHDRGCEAELAAEIGRVLQDGGLPDLSILRARFSPDPEQLPV ITVTSPRLSSYEALIRAPELAEARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| r6 | AAC61728.1 | transposase R6 | Not tested | PAI I CFT073 | Protein | 2e-86 | 43 |
| unnamed | AAL67386.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 2e-86 | 43 |
| unnamed | AAL67341.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 1e-86 | 43 |
| c3607 | NP_755482.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-86 | 42 |
| c5144 | NP_756992.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 1e-86 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pden_0461 | YP_914270.1 | integrase catalytic subunit | VFG1728 | Protein | 5e-87 | 42 |
