Gene Information

Name : Pden_0297 (Pden_0297)
Accession : YP_914107.1
Strain :
Genome accession: NC_008686
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 278251 - 279009 bp
Length : 759 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4492 ferrichrome ABC transporter (ATP-binding protein)

DNA sequence : 
ATGATCGAGGTCAGCAGCCTCTGCAAAAGCTACGGCGCGGCGCCGGTGCTGCACGATGTGTCGCTGAGCCTGCCAAGGGG
CGGCGTCACCTCGCTGATCGGCCCGAACGGGGCGGGGAAATCCACGCTGCTGTCGCTGATCGCCCGGCTGATCGTGCCGG
ATTCCGGCAGCGTGACGGTGGACGGGCTGGACGTGACCCGCACGCCCGGGCCGGTGCTGGCGCGGCGGCTGGCGATCCTG
CGGCAGGAAAACCACCTCGTCGCCCGGCTGACGGTGCGCGAACTGGTGGGCTTCGGCCGTTTTCCGCATTCCGGCGGCCG
GCTGACGGCCGAGGACCGCGCCGCCATCGACCGGGCGCTGGACTATCTGGAACTGGCCCCGTTGGCCGACCGCTTCATCG
ACCAGCTGTCGGGCGGGCAGCGGCAGCGCGCCTTCGTCGCCATGGTTCTGGCGCAGGACACCGATTACCTGCTGCTGGAC
GAGCCGCTGAACAACCTGGACATGAAGCACGCGCAGGCGATGATGCGGCTGCTGGCCAGCGCCGCGCACGACCTGGGCAA
GACGGTGATCGTGGTGCTGCACGACATCAACTTCGCCTCCTGCCATTCCGACCGCATCGTCGCCATGCGGCAGGGCCGCA
TCTTCGCCGCCGGCACGCCAGCGGAAATCGTCACCCCCGACCTTCTGGGCGAGCTTTACGAGATGCAGATCGCCGTGCGC
GAGATCGACGGCCAACGGATCGCGCTTTTCTACGGCTGA

Protein sequence : 
MIEVSSLCKSYGAAPVLHDVSLSLPRGGVTSLIGPNGAGKSTLLSLIARLIVPDSGSVTVDGLDVTRTPGPVLARRLAIL
RQENHLVARLTVRELVGFGRFPHSGGRLTAEDRAAIDRALDYLELAPLADRFIDQLSGGQRQRAFVAMVLAQDTDYLLLD
EPLNNLDMKHAQAMMRLLASAAHDLGKTVIVVLHDINFASCHSDRIVAMRQGRIFAAGTPAEIVTPDLLGELYEMQIAVR
EIDGQRIALFYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-42 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-33 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-33 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-33 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_0297 YP_914107.1 ABC transporter BAC0164 Protein 3e-42 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_0297 YP_914107.1 ABC transporter VFG1042 Protein 3e-42 48
Pden_0297 YP_914107.1 ABC transporter VFG0925 Protein 2e-38 41