Name : Pden_2127 (Pden_2127) Accession : YP_915915.1 Strain : Genome accession: NC_008686 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1134 EC number : - Position : 2129108 - 2129785 bp Length : 678 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20832 cell surface polysaccharide export ABC-2 transporter ATP-binding protein DNA sequence : ATGATCCGGCTCGAGAACCTGACCAAGCGCTATCGGCTCAAGGGCCGCGAGACGCTGGTGGCGGACCGGCTGAACGCCGA GTTCCCCACCGGGGCCTCGGTGGCGCTGCTGGGCCGCAACGGCGCGGGCAAGTCGACGCTGCTCAGGATGATCGCCGGCA CGGTCTCGCCCACGGCCGGGCGGGTGCTGTCGGACGGCACCATCTCCTGGCCGGTGGGCTTTGCCGGCAGCTTCCACCCC GAGCTGACCGGGGCGCAGAACGTGCGCTTCGTGGCGCGCATCTACGGCGTGGATACCGACGAGCTGATCGATTACGTCGA GGATTTCGCCGAGCTGGGCCAGCATTACCACCAGCCCTTCGGCAGCTATTCCTCGGGCATGCGCTCGCGGCTGGCGATGG GCGCCAGCATGGGCATCCATTTCGACACCTATCTGGTCGACGAGGTGACCAGCGTCGGCGACGCCAATTTCCGCGCCAAG TCGCAGCGCGTCTTTGCCGAGCGCATGGCCCGCTCCTCCGCCATCGTGGTCAGCCATTCCATGCCGATGATCCGCAGGAT GTGCACCATGGGCGCCGTCCTGCACCACGGCCGCCTCACCCTGTGCACCGACCTCGAGGAGGCCATCAGAATGCACGAGG AAATCCTCAGGGTCCCCCCGGACACGCAGGACGAGTGA Protein sequence : MIRLENLTKRYRLKGRETLVADRLNAEFPTGASVALLGRNGAGKSTLLRMIAGTVSPTAGRVLSDGTISWPVGFAGSFHP ELTGAQNVRFVARIYGVDTDELIDYVEDFAELGQHYHQPFGSYSSGMRSRLAMGASMGIHFDTYLVDEVTSVGDANFRAK SQRVFAERMARSSAIVVSHSMPMIRRMCTMGAVLHHGRLTLCTDLEEAIRMHEEILRVPPDTQDE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kpsT | CAE85223.1 | KpsT protein | Virulence | PAI V 536 | Protein | 4e-46 | 49 |
kpsT | YP_854396.1 | polysialic acid transport ATP-binding protein KpsT | Not tested | PAI I APEC-O1 | Protein | 2e-44 | 47 |
ctrD | NP_273138.1 | capsule polysaccharide export ATP-binding protein CtrD | Not tested | IHT-A | Protein | 1e-38 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Pden_2127 | YP_915915.1 | ABC transporter | VFG1449 | Protein | 8e-45 | 47 |
Pden_2127 | YP_915915.1 | ABC transporter | VFG0258 | Protein | 5e-39 | 43 |
Pden_2127 | YP_915915.1 | ABC transporter | VFG2563 | Protein | 5e-45 | 42 |