Gene Information

Name : Pden_1839 (Pden_1839)
Accession : YP_915632.1
Strain :
Genome accession: NC_008686
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1837863 - 1838525 bp
Length : 663 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0776 ABC lipoprotein efflux transporter, ATPase subunit, LolD

DNA sequence : 
ATGAGTGACATCCTGGTTCTGGAAGGAATTTCCAAGACTTACGGCATTGGTGGTCCCGCGCCGGTGCCGGTGTTGAACGG
GTTGTCCCTGCAGATCGTCCGAGGCGAGGTGGTGGCGCTGGTCGCGCCCTCGGGCGCCGGCAAGTCGACGCTGCTGCACA
TCGCCGGGCTGCTCGACACCGCGGATTCTGGCCGGGTGCTGCTGAAGGGGCGCGACATGGCCGGGCAGAGCGACCGGGCG
CGGACCGAGGCGCGGCGCGAGGAACTGGGCTTCGTCTATCAGTTCCACCACCTGCTTCCAGAATTTTCGGCGGCGGAGAA
CATCGTCCTGCCGCAACTCGCCAACGGCGTCTCGCAGGCGACGGCGCGGGCGCGGGCGCTGGATCTGCTGGGGCGCGTGG
GGCTGACGCATCGCGCCGATCACCGCCCGGCGCAATTGTCCGGGGGCGAGCAGCAGCGCGTCGCCTTCTGCCGGGCGCTG
GCGAACCAGCCCTCGCTGCTGCTGGCGGACGAGCCGACGGGGAACCTGGACCCTGCGACCTCGGACAAGGTCTTCGACAT
GCTGATGGCGCTGGTGCGCGAGACCGGGCTTGCCGCGCTGATCGCCACCCATAACATGGACCTGGCGGCGCGGATGGACC
GGGTGATCCGGCTGGACGCATGA

Protein sequence : 
MSDILVLEGISKTYGIGGPAPVPVLNGLSLQIVRGEVVALVAPSGAGKSTLLHIAGLLDTADSGRVLLKGRDMAGQSDRA
RTEARREELGFVYQFHHLLPEFSAAENIVLPQLANGVSQATARARALDLLGRVGLTHRADHRPAQLSGGEQQRVAFCRAL
ANQPSLLLADEPTGNLDPATSDKVFDMLMALVRETGLAALIATHNMDLAARMDRVIRLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_1839 YP_915632.1 ABC transporter NC_008702.1.4606598. Protein 9e-32 45
Pden_1839 YP_915632.1 ABC transporter CP001581.1.gene798.p Protein 5e-34 42
Pden_1839 YP_915632.1 ABC transporter NC_012469.1.7685735. Protein 1e-33 42
Pden_1839 YP_915632.1 ABC transporter NC_012469.1.7686878. Protein 2e-35 41