Gene Information

Name : Pden_1660 (Pden_1660)
Accession : YP_915453.1
Strain :
Genome accession: NC_008686
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1642679 - 1643362 bp
Length : 684 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3511 two component transcriptional regulator, winged helix family family

DNA sequence : 
ATGCGCGCCCTGATCGTCGAGGATGAGCCCCGGATCGCCGCCGATCTGGACCGTGCGCTGAAGGCGGCGGGCTTTCTGGT
CGAGACCGTCGCCGATGGCGAGACCGCCTGGTTCCGCGGCGGCACCGAGGATTACGACCTGATCGTGCTGGACCTGAACC
TGCCGCGGCTGGACGGGCTGACGGTGCTGAAACGCTGGCGGGCCGAGGGCTGCGAAACCCCGGTGCTGATCCTGACCGCG
CGCGGCGCCTGGACCGAGCGGGTCGAGGGCATCGATGCCGGCGCCGACGACTACCTGCCCAAGCCCTTTCGCATGGAGGA
ACTGATCGCCCGCGCCCGCGCCCTGGTGCGCCGCGCCGGCGGGCGGGGCAATGCGACCCAGCAGGTCGGGCGGCTGACGG
TGGACCTGAACCGCATGACCGCCGCCATCGACGGCATCCCCGTCGCGGTCACGCCGCTGGAGCTTCGGCTGGTCTCCTAT
CTGGCGCTGAACCGCGACCGCATCGTGCCGCCGACCGAATTGCTGGAGCATCTCTACGGCGACGACGAGTCGCGCGAGTT
GAACGCCATCGAGGCCATCATCACCCGGCTGCGCCGCAAGCTGGGGCCCGGCGTCATCGGCACCCGGCGCGGGTTCGGCT
ATCATCTGGAGGACGGGGCCGGTCAGGCGCAGGGCCGGGCATGA

Protein sequence : 
MRALIVEDEPRIAADLDRALKAAGFLVETVADGETAWFRGGTEDYDLIVLDLNLPRLDGLTVLKRWRAEGCETPVLILTA
RGAWTERVEGIDAGADDYLPKPFRMEELIARARALVRRAGGRGNATQQVGRLTVDLNRMTAAIDGIPVAVTPLELRLVSY
LALNRDRIVPPTELLEHLYGDDESRELNAIEAIITRLRRKLGPGVIGTRRGFGYHLEDGAGQAQGRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_1660 YP_915453.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-34 44
Pden_1660 YP_915453.1 two component transcriptional regulator BAC0487 Protein 3e-26 42
Pden_1660 YP_915453.1 two component transcriptional regulator BAC0197 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_1660 YP_915453.1 two component transcriptional regulator VFG0473 Protein 6e-23 42