Gene Information

Name : Pden_1360 (Pden_1360)
Accession : YP_915157.1
Strain :
Genome accession: NC_008686
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1325264 - 1326034 bp
Length : 771 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20058 ABC transporter ATP-binding protein

DNA sequence : 
ATGACGCCGCCTCTGGAACTCGACGGCGCGGGCCGCCGGGTGCAGGGGCGCGACATCGTCGCCGATGTCAGCCTGTCGCT
GCAACCGGGCGAGATGCTGGGCCTGATCGGGCCGAACGGCTCGGGCAAATCGACGCTGCTGAACCTGATGGCGGGGCTGA
TGCGGCCCTGCCGGGGCGAGGTCCGCTTGAACGGCCAGCCGATGGCCCGCCTGCGCCGCCGCCAGATCGCGCAGCGCCTG
GCGCTGGTGGCGCAATCCGCCGACACGGGCGACCGCATCACCGTGCGCGAGGCGGTCGAGCTTGGTCGCACCCCTTGGCT
GGACCCGCTGCGGCCCTGGAGCCCCCGCGACGACGCCGCCGTCGCCGCCGCGCTAAAGGCAGTGGACATGGCGCATATGG
CCGCGCGCGACTGGTCCTCGCTGTCGGGGGGCGAGCGCCAGCGCGCCCATATCGCCCGCGCCCATGCCCAAAGCCCGCAG
ATCCTGCTGCTGGACGAGCCGACCAATCACCTGGACATCCACCACCAGCTTGGCATCCTCGACCTGGTGGCCGGGCTGGG
CACCACCACCGTCATCGCGTTGCACGACCTGCACCATGCCTTGCGCTGCGACCGGGTGCTGGTGATGCAGGCGGGCCGCT
GCGTGGCGCTTGGCCCGCCCGCCGAAACCCTGACCCCCGCGCTGATCCGCGAGATCTTCGCCATCGAGGCCGAACTGATC
CTCCATCCCGGCGGCGCGCGCCCGGTCTTCGCCTTCCAACGCCTTTCGTGA

Protein sequence : 
MTPPLELDGAGRRVQGRDIVADVSLSLQPGEMLGLIGPNGSGKSTLLNLMAGLMRPCRGEVRLNGQPMARLRRRQIAQRL
ALVAQSADTGDRITVREAVELGRTPWLDPLRPWSPRDDAAVAAALKAVDMAHMAARDWSSLSGGERQRAHIARAHAQSPQ
ILLLDEPTNHLDIHHQLGILDLVAGLGTTTVIALHDLHHALRCDRVLVMQAGRCVALGPPAETLTPALIREIFAIEAELI
LHPGGARPVFAFQRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-24 45
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-20 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-20 43
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-20 43
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-20 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-21 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-21 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-15 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-15 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-15 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_1360 YP_915157.1 ABC transporter BAC0164 Protein 1e-24 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pden_1360 YP_915157.1 ABC transporter VFG1042 Protein 9e-25 45