Gene Information

Name : Cpha266_0473 (Cpha266_0473)
Accession : YP_910954.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 521449 - 522165 bp
Length : 717 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0264 ATPase

DNA sequence :
ATGGGTACAACGATGTTCAGACTTGAACATATCCGAAGGGAGCTTGCTCTGTCACGGGATGTCCGTCAGACCATCATTCC
CGATCTCTCCCTTGAAATCGAGGCAGGAGAGTTTGTCGCTATTACCGGGCCCTCCGGTTCAGGTAAATCGACGCTTCTCT
ATATGATGGGAGGGCTTGACAAGCCTACGTTCGGTAATGTCTGGCTGGATGGCGAGGAGCTTACCGAAAAGGATGAGTCA
GAGATGAACCGGATTCGAAACGAAAAGATCGGGTTTATCTATCAGTTTCATTTTCTTCTTCCCGAGTTTACCGCATTGGA
AAATGTCAGTATGCCGATGATGATCAATGGGCGCTTCAATAAAAAAGAGATCAAGGATCGGGCAAAGATGCTGCTTGATA
CGGTTGGTCTCGAGAACAAGTATACCAACAAGCCGAGCCAGCTTTCCGGAGGCCAGCAGCAGAGGGTTGCAATTGCCCGC
GCACTTGCAAATGAACCGAAGGTGCTTCTTGGCGATGAGCCTACCGGCAATCTGGATTCGAAATCGGCAAAAAATGTCTA
TGAGCTTTTTGACCGGTTGAATCAGGAAAAAAATCAGACGATCGTGGTGGTAACCCATGATGAGGATTTTGCCAACCGGG
CTGGACGGAGAATTCATCTGGTGGACGGTATGATCGAGAGCGACAGCCCGCTCCGGGTTATGGCTGGGCGTTCTTGA

Protein sequence :
MGTTMFRLEHIRRELALSRDVRQTIIPDLSLEIEAGEFVAITGPSGSGKSTLLYMMGGLDKPTFGNVWLDGEELTEKDES
EMNRIRNEKIGFIYQFHFLLPEFTALENVSMPMMINGRFNKKEIKDRAKMLLDTVGLENKYTNKPSQLSGGQQQRVAIAR
ALANEPKVLLGDEPTGNLDSKSAKNVYELFDRLNQEKNQTIVVVTHDEDFANRAGRRIHLVDGMIESDSPLRVMAGRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-27 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpha266_0473 YP_910954.1 ABC transporter NC_008702.1.4606598. Protein 5e-36 49
Cpha266_0473 YP_910954.1 ABC transporter NC_012469.1.7686878. Protein 8e-39 47
Cpha266_0473 YP_910954.1 ABC transporter CP001581.1.gene598.p Protein 7e-34 45
Cpha266_0473 YP_910954.1 ABC transporter CP001581.1.gene798.p Protein 9e-31 44