Gene Information

Name : Cpha266_2615 (Cpha266_2615)
Accession : YP_913026.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3000483 - 3001049 bp
Length : 567 bp
Strand : -
Note : PFAM: sugar transferase; KEGG: gme:Gmet_1337 sugar transferase

DNA sequence : 
ATGTTCATGAAGCGACTTTTTGATATCACTATGTCGCTGCTGGCTTTTTTTGTGTTCGGTTTTCCGATGCTTGTTGTGGC
TTTGTTCATAAAGCTTACGTCGAAAGGCCCGGTACTTTACTGGTCGGATCGTGTTGGAAAGAACAATGCTATTTTCAGGA
TGCCGAAGTTCCGCACCATGCTTGTTGATACGCCTGCGGTTGCAACCCACCTCATGTTAGATCCTGACAGATTTCTTACA
CCAATTGGCAAGTTTCTCCGGAAGACGAGCATTGATGAACTGCCTCAGCTCTGGAGCATTCTGATAGGAGATATGAGTAT
TGTCGGGCCTCGTCCGGCGTTGTTCAATCAGGATGATCTGATTGCTTTGCGGACTGAAAAAGGGGTGCATATATTGACTC
CTGGACTTTCTGGCCCTGCGCAGATTAACGGCCGTGATGAATTGCCGATACCGGTAAAGGTTGAATTCGATGAGTATTAT
CTTAAAAATCGCTCCTTTCTTTTTGACCTGAAAATAATAGTTCAGACCATTTTTAAGGCGGTCAAGGGCGATGGAGTAAC
GCATTGA

Protein sequence : 
MFMKRLFDITMSLLAFFVFGFPMLVVALFIKLTSKGPVLYWSDRVGKNNAIFRMPKFRTMLVDTPAVATHLMLDPDRFLT
PIGKFLRKTSIDELPQLWSILIGDMSIVGPRPALFNQDDLIALRTEKGVHILTPGLSGPAQINGRDELPIPVKVEFDEYY
LKNRSFLFDLKIIVQTIFKAVKGDGVTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-38 51
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpha266_2615 YP_913026.1 sugar transferase VFG1369 Protein 5e-29 50
Cpha266_2615 YP_913026.1 sugar transferase VFG1309 Protein 6e-39 49