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Name : Cpha266_2346 (Cpha266_2346) Accession : YP_912758.1 Strain : Chlorobium phaeobacteroides DSM 266 Genome accession: NC_008639 Putative virulence/resistance : Virulence Product : lipopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3524 EC number : - Position : 2721566 - 2722765 bp Length : 1200 bp Strand : - Note : KEGG: bcn:Bcen_0295 lipopolysaccharide biosynthesis DNA sequence : ATGGACAGGGCTTTTTTTTATCAGCAGTACAAACCATCAATGAGTTCATCGTCACTATTTTTTAAAAACGCAAAGATACG GCTTGAGCAGATCAGGACGCACGCCATATTGCGCAACAAACTCTTTCTTCTGACCGTTGTTCTCCCCACTGTTCTTTCCA TACTTTATTTCGGGATCATAAAAAGCGATGTTTACGTATCCGAATCCCGTTTTGTTGTAAGAAGTCCCGAGCGACCGGTA CAGACCGGTCTTGGTGCCATCATACAGGGCGCAGGATTTGCCAGGGCTCTCGACGATACCTATAGCGTGCACGATTACAT GCTTTCGCGCGATGCGCTGTATTCGGTCAATCGCAGCTTCGACCTTCGCCAGGCATTCAGCAGAAAAGAGGCCGATCTGT TCAGCCGATTCAACCCTCTTGGCATCGACAACAGTTTTGAAGCCCTGTTTCTTTACTATCAGCATCGGGTTGAAATCAAT CTGAACGTCTCATCATCGATCTCGACATTGAGAACCAGAGCGTTTACGGCAACTGATTCCAGGGAACTCAACGAACTGCT GTTGCGGCGGGCAGAAGAGCTCATCAACAAACTTAACGAGCGCGGTCGCAATGATCTTATTCGCTATGCGCAGCAGGAAG TTAATGTGGCGCAACAGCAATTGAGGAAAACCGCTCTTGCGCTCTCATTGTTCAGGAACAAAAACGGTGTCTTCGACCCT GTAGGGCAGTCGGCGTTGCAACTGCAACAGGTAGCCAAACTGCAGGATGAATTGATTGCCACGAAAACCCAGCTTGCGCA GGTTACCGCGTTTACCCCCGAGAGCCCGCAGATTCCCGTACTGCAGCAGCGTGTCAGCGCAATACAGTCTGAAATCGACA CGGAAACCGCAAAAATTACCGGTAAATCAACCGGCTCCGATCCCTCTCTTACCAGCAAAGCTGTCGAATACGAACGACTC TCGCTCGACAGATCGTTTGCGGAAAAACAGCTTGCAGCAGCCATGGCTTCGCTTGAACAGGCACGTAACGAAGCACAGCG CAAGCAACTCTACCTCGAACGGATCGTGCAGCCGAACAAGCCCGACATTGCCATCGAACCGCAGCGCATCAGAGCTATTT TGACCACGCTTGCAGTAGGCGTGGTTGTTTGGGGAATTCTCTCCATGCTTTTTGCCGGTATTCGCGAACATCACGATTGA Protein sequence : MDRAFFYQQYKPSMSSSSLFFKNAKIRLEQIRTHAILRNKLFLLTVVLPTVLSILYFGIIKSDVYVSESRFVVRSPERPV QTGLGAIIQGAGFARALDDTYSVHDYMLSRDALYSVNRSFDLRQAFSRKEADLFSRFNPLGIDNSFEALFLYYQHRVEIN LNVSSSISTLRTRAFTATDSRELNELLLRRAEELINKLNERGRNDLIRYAQQEVNVAQQQLRKTALALSLFRNKNGVFDP VGQSALQLQQVAKLQDELIATKTQLAQVTAFTPESPQIPVLQQRVSAIQSEIDTETAKITGKSTGSDPSLTSKAVEYERL SLDRSFAEKQLAAAMASLEQARNEAQRKQLYLERIVQPNKPDIAIEPQRIRAILTTLAVGVVVWGILSMLFAGIREHHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrB | NP_273136.1 | capsule polysaccharide export inner-membrane protein | Not tested | IHT-A | Protein | 1e-65 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpha266_2346 | YP_912758.1 | lipopolysaccharide biosynthesis protein | VFG0256 | Protein | 6e-66 | 49 |
| Cpha266_2346 | YP_912758.1 | lipopolysaccharide biosynthesis protein | VFG0698 | Protein | 4e-69 | 46 |
| Cpha266_2346 | YP_912758.1 | lipopolysaccharide biosynthesis protein | VFG0686 | Protein | 4e-69 | 46 |
| Cpha266_2346 | YP_912758.1 | lipopolysaccharide biosynthesis protein | VFG2565 | Protein | 9e-77 | 45 |
