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Name : Cpha266_2330 (Cpha266_2330) Accession : YP_912744.1 Strain : Chlorobium phaeobacteroides DSM 266 Genome accession: NC_008639 Putative virulence/resistance : Virulence Product : capsule polysaccharide biosynthesis Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3562 EC number : - Position : 2689037 - 2690359 bp Length : 1323 bp Strand : - Note : PFAM: Capsule polysaccharide biosynthesis; KEGG: cjr:CJE1600 capsule polysaccharide export protein KpsS DNA sequence : ATGATCAAAGGTGGACTTGAGGCTTTTTCAGGAAAGCGCATGCTCTTGTTGCAGGGGCCTGTCGGTCCTTTTTTCAGGCG CCTTGCCCGTGATCTGCGCAATGTCGGAGCAGAGGTGTTCAAGGTGAATTTCAATGCCGGTGATTGGCTGTTTTATCCGA AAGATGCCCTGAACTATCGGGGCGGCATGGAGCGCTGGCCTGCTGAAATCGAATGCTTGCTGAAGAGGCTGCGAATCGAT CTGCTGATGCTTTTCGGAGATTGCAGACCGGTTCATCGCATTGCCCATGCGGCGGCCTCTCGTCTCGGCATTGAGATCGG AGTGTTTGAGGAAGGGTATATCCGTCCCAACTATGTGACACTTGAACGCGATGGAGTTAATGGCTATTCGTTGCTCTCAA ATGAGTTTCATCGCCATATCCAGAGCGCTCCGGTTGAGGTGCCGGAAGAACGACAGGTCGGAAAAACATTCTGGCCGATG GTCTTGTGGGGCTTCCTGTATTTTACCGCTGGAGGGCTCGGGTTTCTGTTTTTTCCTCATTATCGCCATCACAGGCCCTT GAGCGTTCTGGAGGCGTTGCCCTGGATTCGGTCGGTCTGGAGGAAGTACTGGTATGCGATAAGGGAAAAAGGAGTGCTTG ATGAATTGACGGAGAGATGGCACAAGCGATACTATCTTGTGCCGCTCCAGGTGCATAACGATGCCCAGATTACGGAGCAT TCCGGCTTTGGCGATATCGAGTCCTTTATTACTGCCGTTATCAGTTCGTTTGCCCGTCATGCTCCGAAAGGGACGGTTCT GGTTTTCAAGCATCATCCGATGGATAGAGGGTATCAGGATTACAGTGCGCTGATTCGGCAAAGCAGCGAACGCGAGCGGA TAGGTTCGCGTGTTTATTATCTGCACGATCAGCATCTGCCGACATTGCTCAAGCATGCACTTGGTGTAACGGTCATCAAC AGTACGGTCGGTCTTTCGGCTGTTCATCACGGCGTGCCGACAAAAGTATGCGGTTCCGCCATTTATGATAGAGAAGGTCT GACAAGTCGTAAAAGCCTGGGAGAGTTCTGGAAATATGCCAAAACCGAAAAACCTGATCCGGTTATGTACAACCGTTTCA GAGCGCACCTCATTGTCAGTACTCAGCTTAATGGAAGTTTTTATAAGCTGTTGACGCATACGGGACTTCGTTGTGGATTG CTATGGAGCTCCCGGCCATCTCTTTCGGCGTCCGGGTGGATCGAAAGAGATCTCTATCCGCTTGTGGTTGACACTGCGGC AACGGCATTGATTGAAATCGAAGAGGATGCATCTGTTATGTAA Protein sequence : MIKGGLEAFSGKRMLLLQGPVGPFFRRLARDLRNVGAEVFKVNFNAGDWLFYPKDALNYRGGMERWPAEIECLLKRLRID LLMLFGDCRPVHRIAHAAASRLGIEIGVFEEGYIRPNYVTLERDGVNGYSLLSNEFHRHIQSAPVEVPEERQVGKTFWPM VLWGFLYFTAGGLGFLFFPHYRHHRPLSVLEALPWIRSVWRKYWYAIREKGVLDELTERWHKRYYLVPLQVHNDAQITEH SGFGDIESFITAVISSFARHAPKGTVLVFKHHPMDRGYQDYSALIRQSSERERIGSRVYYLHDQHLPTLLKHALGVTVIN STVGLSAVHHGVPTKVCGSAIYDREGLTSRKSLGEFWKYAKTEKPDPVMYNRFRAHLIVSTQLNGSFYKLLTHTGLRCGL LWSSRPSLSASGWIERDLYPLVVDTAATALIEIEEDASVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsS | YP_854344.1 | polysialic acid capsule synthesis protein KpsS | Not tested | PAI I APEC-O1 | Protein | 3e-55 | 41 |
| kpsS | AAZ04471.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 2e-55 | 41 |
