Gene Information

Name : Cpha266_1954 (Cpha266_1954)
Accession : YP_912392.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2266321 - 2267244 bp
Length : 924 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: pca:Pcar_0539 transposase

DNA sequence :
ATGAAAGCGCGTAAAAGCTGGATCAGCGACAAGGGACCGTTGTCGGTATCGACCCAATGTGAACTTGCCGGAGTAACCCG
GTCAGGGTACTACGGGCAAAGCAAAAGCCTCATGCCAAATACTGAAGATCTGGAACTGATGAAACTTATCGACGAGGAGT
ACACCCGACATCCGTTTTATGGAAGCCGGCGGATGAAGCGGGTACTGCTCGCCCAAGGGCGCAAGGTCAACCGGAAACGA
GTACAGCGTCTGATGCGTAACCTGGGGCTTGCTGGTATCGCTCCAGGGCCCAATACCAGCAAGCCGCATCCGCAGCACAA
GATCTATCCATACCTGTTGCGAGGTCTTGTCATTACCAGACCGAATCATGTCTGGTCGACCGATGTGACCTATTGCCGGT
TACCCGGCGGCTTCATGTATCTGACGGCCGTCATCGACTGGTATTCCCGCAAGGTGCTGGCATGGAGGCTTTCGAATTCC
CTGGATAGCAGCTTCTGTGTTGATTGTCTGGAAGAAGCTATCCGCAAGTACGGAATGCCGGAAATCTTCAACACCGATCA
GGGTACTCAGTACACCAGCGAAGCGTTTACCGGCGTACTCAAGAGCCATGACATCCGCATCAGTATGGATGGTCGGGGTC
GGGCGCTGGACAATATCTTCGTCGAACGGCTATGGCGGAACGTCAAGCAAGAAGACCTGTATCTGAAAGGCTATGAGACA
GCGGTCGAAATGATGCGGGGATTAACGGAATATTTCCGTTTTTACAATATCGAGCGGCCTCATCAGTCGCTGGGGTACAA
AACCCCGGACGAGGTATACGAAAGCGCAACAGGTGGCGGTGCTCGTATCGTTGACAAGTTCTTTCAAAAGAGTGTCTCCG
AAGGGTCGTCGGAGGCTACAGGGCCGCAACAGGAAGCGGCATAA

Protein sequence :
MKARKSWISDKGPLSVSTQCELAGVTRSGYYGQSKSLMPNTEDLELMKLIDEEYTRHPFYGSRRMKRVLLAQGRKVNRKR
VQRLMRNLGLAGIAPGPNTSKPHPQHKIYPYLLRGLVITRPNHVWSTDVTYCRLPGGFMYLTAVIDWYSRKVLAWRLSNS
LDSSFCVDCLEEAIRKYGMPEIFNTDQGTQYTSEAFTGVLKSHDIRISMDGRGRALDNIFVERLWRNVKQEDLYLKGYET
AVEMMRGLTEYFRFYNIERPHQSLGYKTPDEVYESATGGGARIVDKFFQKSVSEGSSEATGPQQEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 4e-59 54
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 1e-63 51