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Name : Cpha266_1886 (Cpha266_1886) Accession : YP_912326.1 Strain : Chlorobium phaeobacteroides DSM 266 Genome accession: NC_008639 Putative virulence/resistance : Virulence Product : sigma-54 dependent trancsriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 2182683 - 2183822 bp Length : 1140 bp Strand : + Note : PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: cte:CT1497 sigma-54-dependent transcriptional regulator DNA sequence : ATGAAACGCAATAGCTCGTTTATTGGAAAATCACAACTGGTCACCCAGCTCAGGGAACTCGCACTGCAGGTTGCCGATAC GGAAATCACTGTCCTTATCATCGGAGAGACCGGGGCAGGAAAAGAGGTACTTGCCCGGTTCATCCATGCCAACAGCCGAC GTGCTGATAAAAGTTTTATTCCCGTCAACTGCGGAGCCATCCCGTCGGGAATTCTTGAATCAGAGCTTTTCGGACATGAA AAAGGGGCTTTTACCGGAGCTTTTCAAAGCAGAAAAGGGTATTTCGAAAGTGCCGACAGGGGAACAATTTTTCTTGATGA AATCGGTGAAATGCCGCTTGAAACACAGGTCAAGTTTCTTCGGGTTCTTGAAACAGGAGAGTTTCAGCGGGTAGGATCTT CGGATTCCGTTTTTGCCGATACACGAATCATTGCGGCAACGAACAAAAACCTCTATCAGGCTGTCGCTGACGGCAACTTC CGCGAAGATCTCTACTACCGCCTGCGCAGTGTGGAACTCCAGATCCCACCGCTCAGAGAACGAGGCCCCGATATTTTGCT CCTCGCAGAACATTTCATTCACGAGTTCGAACGAAAACACCGGGTAATATTTGAAGGATTCACCCCTGAATCTGCAGAAC TCATGCTTCGCTATCCATGGCCCGGAAATATCAGAGAGCTGAGAAATCTTGTCGAATCCCTGCTCATTCTTGAAAAAGGA AAAAGAATAACAACGGAAATTCTTGAAAAACATCTCATCCAGCGCAACCGCTACAAAAGTCTCGTGCACGAACCGACAAA ACAGGAAAACCAGGAACTCAATATCATCTACCGAAGCCTGATCCAGCTCCGTCAGGACATTAACGACATCAGGCAGCTTC TTGAACGTCTTATTGAAGATCGTCAGGAGAGACCGCTGCTGCTTCCCGACACCACTGCGCACGTAGCGCCAGCCGGAAAT CAAATCGTTGAAGAGAGAGCCTCGGAAACATCATCAACCGTGAGTTCTCTGGATGAACTGGAAAAAAAAACCATTGCCGA AACGCTTGCCGCCTGCGAAGGAAACAAACGAAAAACAGCAGGAATCCTTGGCATAACTGAACGAACGCTCTATCGAAAAA TCAAAACCTACGACCTTTAG Protein sequence : MKRNSSFIGKSQLVTQLRELALQVADTEITVLIIGETGAGKEVLARFIHANSRRADKSFIPVNCGAIPSGILESELFGHE KGAFTGAFQSRKGYFESADRGTIFLDEIGEMPLETQVKFLRVLETGEFQRVGSSDSVFADTRIIAATNKNLYQAVADGNF REDLYYRLRSVELQIPPLRERGPDILLLAEHFIHEFERKHRVIFEGFTPESAELMLRYPWPGNIRELRNLVESLLILEKG KRITTEILEKHLIQRNRYKSLVHEPTKQENQELNIIYRSLIQLRQDINDIRQLLERLIEDRQERPLLLPDTTAHVAPAGN QIVEERASETSSTVSSLDELEKKTIAETLAACEGNKRKTAGILGITERTLYRKIKTYDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 1e-37 | 41 |
