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Name : Cpha266_1765 (Cpha266_1765) Accession : YP_912206.1 Strain : Chlorobium phaeobacteroides DSM 266 Genome accession: NC_008639 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2006131 - 2007426 bp Length : 1296 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGACATTACCTATGTCCGACAGAACCTGGCTGAAATAGAATCCATGTTGCAGAATCGCCAGCTTGCGTCTGAAAA ACCCCGGCTCCGTCAGCTCCTTGAATACGATAAAAACCGCAGAGAGCTTGTTCAGCGATCCGATGAGATGAAAGCTCAAC GCAATAAGGTATCGAAGGAAATTGCCGACATTAAAAGAACCGGCCAGGGATCGGGCGAGGAACTTATCCGACAGATGAAA GAGGTTTCCGATGAGATCACCATGATGGACGCAACCCTCTCAAAGCTTGCATCAGACATTGAAGAGATACTGCTCTCCCT GCCAAACAGACTGCATGAATCCGTGCCGACAGGCAAATGCGCAGAGGACAATGTAATCTGCAAAGCACCCGTTCCCTATC TGCATCTGCTTGATTTCCCGATAAAAAACCATCTTGAACTGGGCAGATCACTCGGCATTCTCGATTTTGAACGAGGCGCG AAAATCAGCGGTGCCGGCTTCCCTGTCTATATCGGAAAAGGCGCGCGACTTGAACGTGCGCTGATTAACTTCATGCTCGA TTACCATACCGACCATCACGGCTTCACCGAAGTGTTTCCCCCGTTTTTTGTCAATCAGGAATCACTGCGAGGTACTGGCC AATGGCCTAAATTCGCTGACCAGGTCTACCATATCGAAGAAGACAATCTCTATGCCATTCCTACGGCTGAAGTACCGGTC ACAAACCTCCATCGCAATGAAATGATTGATGCTGAACGGCTTCCCGTCTCCTATGTTGCATATTCCGCATGTTTCAGACG GGAAGCGGGAAGCTACGGCAAGGATACCCGAGGATTTTTACGGGTACACCAGTTTAACAAGGTTGAAATGGTAAAATTCA CCCGTCCTGAAGAGTCCTATCAAGAGCTTGAAAAGATTCTCATGAGCGCCGAAGCAATTCTGCAGGCACTTATGATCCCT TATCGGGTACTCCTGCTCTGCAGCGGCGACATCAGTGCCAATGCCACAAAATGCTATGATATCGAAGTGTGGTCACCAGC AGAAGAGAAATATCTTGAAGCTTCGAGCTGTTCGAATTTCGAGGATTACCAGGCAAGACGCATGAACATCCGATTCAAGG CCGACAGTCGCTCAAAGCCGGAGTTTGTACATACGCTTAACGGATCAGGCCTTGCAACATCCAGACTGATGGTATCCCTG CTTGAACACTATCAGAACCGGGACGGCTCGATAACCATTCCGGAGGCCTTGCGACCCTATACAGGATTCACATCGATCGA TCAGCTAACATCCTGA Protein sequence : MLDITYVRQNLAEIESMLQNRQLASEKPRLRQLLEYDKNRRELVQRSDEMKAQRNKVSKEIADIKRTGQGSGEELIRQMK EVSDEITMMDATLSKLASDIEEILLSLPNRLHESVPTGKCAEDNVICKAPVPYLHLLDFPIKNHLELGRSLGILDFERGA KISGAGFPVYIGKGARLERALINFMLDYHTDHHGFTEVFPPFFVNQESLRGTGQWPKFADQVYHIEEDNLYAIPTAEVPV TNLHRNEMIDAERLPVSYVAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEESYQELEKILMSAEAILQALMIP YRVLLLCSGDISANATKCYDIEVWSPAEEKYLEASSCSNFEDYQARRMNIRFKADSRSKPEFVHTLNGSGLATSRLMVSL LEHYQNRDGSITIPEALRPYTGFTSIDQLTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-92 | 48 |
