Gene Information

Name : Cpha266_1509 (Cpha266_1509)
Accession : YP_911955.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1712846 - 1713592 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0953 ABC transporter, ATP-binding protein

DNA sequence :
ATGAAAGAGTTCATAAAGGATCAAAGAGCAGAAAACGAATCATCCCCGATGGTGCTTCAGGTTCGGGGTATCAGTAAACG
GTACAGAATGGGCGAAGTTGTGGTAAACGCTCTCAATAAGGTATCGATGGATTTTTATTCAGGAGAGCTTGCCGTACTCC
TGGGAGCTTCCGGCAGCGGAAAATCGACCCTGCTCAACATTATCGGAGGTCTCGACCTTCCGTCGGAAGGAAGTCTTTTT
TTTCATGGCCTTGAACTCACTGCGGCTTCCGAGAAGGAGCTTACGGCCTATCGTCGCCGGGCTATCGGGTTCGTGTTCCA
GTTTTACAACCTCATTTCAAGCCTCACGGCCCTTGAGAATGTTCAGCTTGTCACCGATATAGCGGAAAATCCCATCTCTC
CCGAAGAGGCGCTGATGCTTGTGGGGCTTGAAAACCGCATGAACCATTTTCCCGCTCAGCTATCCGGAGGCGAGCAGCAG
CGGGTAGCCATTGCAAGGGCTCTGGCAAAACGTCCGGAACTGCTGCTTTGCGACGAACCGACCGGAGCGCTTGACTATCA
GACCGGCAAGATTGTGCTTGATGTGATCGATCGCGTGAACCGTAATCTCGGAACCACGACGCTCGTGATTACCCATAACG
TTTCGATAGCCGGAATGGCCGATCGCGTTATTACCCTTCGGAGCGGAGAGGTGGTCGAAGACCGGCGCAATACTCGCAAA
CTCTCTCCATCGGAACTCTCATGGTAG

Protein sequence :
MKEFIKDQRAENESSPMVLQVRGISKRYRMGEVVVNALNKVSMDFYSGELAVLLGASGSGKSTLLNIIGGLDLPSEGSLF
FHGLELTAASEKELTAYRRRAIGFVFQFYNLISSLTALENVQLVTDIAENPISPEEALMLVGLENRMNHFPAQLSGGEQQ
RVAIARALAKRPELLLCDEPTGALDYQTGKIVLDVIDRVNRNLGTTTLVITHNVSIAGMADRVITLRSGEVVEDRRNTRK
LSPSELSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpha266_1509 YP_911955.1 ABC transporter NC_012469.1.7685735. Protein 3e-53 51
Cpha266_1509 YP_911955.1 ABC transporter CP001581.1.gene798.p Protein 3e-39 44
Cpha266_1509 YP_911955.1 ABC transporter NC_008702.1.4606598. Protein 1e-27 42
Cpha266_1509 YP_911955.1 ABC transporter NC_012469.1.7686878. Protein 3e-35 41