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Name : Cpha266_1481 (Cpha266_1481) Accession : YP_911931.1 Strain : Chlorobium phaeobacteroides DSM 266 Genome accession: NC_008639 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 1678623 - 1679879 bp Length : 1257 bp Strand : - Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mac:MA4626 reverse transcriptase DNA sequence : ATGACAAAGCCTTATGAGATTTCCAAACACCTCGTTCTGGAATCATACAGAACGGTCAAAGCAAACAGAGGAGGTGCCGG AGTAGATCAGGAATCGATCGAAGCCTTCGAGAAGAATCTGAAAGGCAATTTGTACAAGCTCTGGAATCGTCTCAGCTCCG GGAGCTATTTCCCGCCGCCAGTCAAAGGGGTAGGCATACCCAAGAAAACCGGCGGCATACGGATGCTGGGCGTACCAACA GTAGCGGATCGGGTTGCCCAGACGGTAGGCAAGGAGACGCTTGAGCCTCTGCTGGAACCGATCTTTCACCAGGACTCATA CGGGTACAGACCAGGCCGAAGTGCGCTGGATGCCGTGGGAGTGGTGAGAGAGCGGTGCTGGAAGTATGATTGGGTAGTCG AGTTTGATATCAGCAAGTTCTTTGACACGATGAATCATGAGCTGTTGATGCGAGCAGTAAGGAAGCACTGCCAGATCGAA TGGGTGTTGCTCTATGTCGAGCGCTGGCTGAAAGCGCCGATGATGAGCCCGGAAGGAGATCTGGTAGAGCGGACAAAGGG AACACCGCAAGGCGGGGTAATAAGCCCACTGTTAGCGAATCTGTTTCTGCACTATGCCTTTGACCGGTGGGTCAGCGAAA ATCTTCCCGGTGTGCCGTTCTGTCGGTATGCCGACGATGGGGTGCTGCACTGTAAAAGCAAAGAGCAGGCGGTGCTGGTC ATGAAAAAGATAACGAAAAGGTTTGAAGCGTGCGGATTGCGAGTAAACCCGGACAAAACACGGATCGTCTATTGCAAGGA TGACAAACGAAAGGAAGATCATCCGGTAACGAGCTTTACGTTTTTAGGCTATACCTTTCGACCACGACAGGTGAAGGATA AACATGGCCGAATATTCGTGGGGTTCACACCGGCGGTGAGTTCGGGATCGCTGAAAACGATGCGAAGAACCATAAGAAGC TGGCATCTGCAATTGAAAAGCGATAAGCAGATTGAGGAACTATCAAAAGCGATCGACCCGGTACTGAGGGGGTGGAAGAA CTACTTCTGTCGATTCAACGCCTCGGCAATGAAACCGGTATGGCATCATGTCAATCTGTATCTGACAAGGTGGCTGATGC GGAAATACCAAAAGTATGCAGGTCGTCTCAAACGCGCAGTCGGTGTGCTTGAACGGATAGCGAGAGCAAAGCCTTCAGCG TTTGTGCATTGGAAATTGGGGTGCATTCCCAAAGGCTGGATAATGGGAGCCGGATGA Protein sequence : MTKPYEISKHLVLESYRTVKANRGGAGVDQESIEAFEKNLKGNLYKLWNRLSSGSYFPPPVKGVGIPKKTGGIRMLGVPT VADRVAQTVGKETLEPLLEPIFHQDSYGYRPGRSALDAVGVVRERCWKYDWVVEFDISKFFDTMNHELLMRAVRKHCQIE WVLLYVERWLKAPMMSPEGDLVERTKGTPQGGVISPLLANLFLHYAFDRWVSENLPGVPFCRYADDGVLHCKSKEQAVLV MKKITKRFEACGLRVNPDKTRIVYCKDDKRKEDHPVTSFTFLGYTFRPRQVKDKHGRIFVGFTPAVSSGSLKTMRRTIRS WHLQLKSDKQIEELSKAIDPVLRGWKNYFCRFNASAMKPVWHHVNLYLTRWLMRKYQKYAGRLKRAVGVLERIARAKPSA FVHWKLGCIPKGWIMGAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 5e-109 | 53 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 7e-79 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpha266_1481 | YP_911931.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 4e-79 | 43 |
