Gene Information

Name : Cpha266_1243 (Cpha266_1243)
Accession : YP_911700.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1410120 - 1410854 bp
Length : 735 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0869 ATPase

DNA sequence : 
TTGTCTCTACAAGGCATAGTGATCGAAGGGCTCAAAAAACAATATGGAAGCGGCGAAACCCTTGTCGATGCCCTTAAGGG
GGTTGATATGCAGGTTGCGCCCGGCGAGGTTGTGGGGCTTATCGGCCCCTCAGGGTCCGGTAAAAGCACCTTGCTGAAAT
GCCTTGGGGCGGTTATCGAGCCTTCGTCAGGCAGAATGACTCTGGGGGATCTGGTGATTTTTGATGGTCAATGGAAAATT
CCGGATCTTCGGGCGCTTCGCCGCGATAAAATAGGCTTTGTGTTTCAGGCGCCCTATCTGATTCCCTTTCTTGATGTGAC
CGATAATGTCGCGTTGCTTCCGATGCTCGCAGGTGAACGAAACAGTGAGGCCCGCAGCCGGGCGATGGAGCTTCTTGAAG
CTCTCGACATAGGGCATCGGTCAAAAGCCATGCCCTCGCAGCTCTCGGGTGGTGAGCAGCAGCGCGTGGCTATTGCCAGG
GCGCTTATCAATCGTCCGCCGGTGATTCTCGCCGATGAACCGACAGCTCCGCTCGACAGTCATCGTGCGCTTGCGGTGAT
CGGCATCCTTAATGAGATGGCCCGTCAGTATGAGACGGCTATTATCATCGTAACCCATGATGAAAAAATCATACCTACCT
TTAAGCGGATCTATCAAATTCGCGATGGTCGCACTCATGAAGAGGTTGGTGAGGGAAAATCTCCTTCGGAACAGCTTAAA
ACCTATTTGGAATGA

Protein sequence : 
MSLQGIVIEGLKKQYGSGETLVDALKGVDMQVAPGEVVGLIGPSGSGKSTLLKCLGAVIEPSSGRMTLGDLVIFDGQWKI
PDLRALRRDKIGFVFQAPYLIPFLDVTDNVALLPMLAGERNSEARSRAMELLEALDIGHRSKAMPSQLSGGEQQRVAIAR
ALINRPPVILADEPTAPLDSHRALAVIGILNEMARQYETAIIIVTHDEKIIPTFKRIYQIRDGRTHEEVGEGKSPSEQLK
TYLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpha266_1243 YP_911700.1 ABC transporter CP001581.1.gene798.p Protein 5e-38 46
Cpha266_1243 YP_911700.1 ABC transporter CP001581.1.gene598.p Protein 4e-33 41