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Name : clpC1 (BAD_0573) Accession : YP_909436.1 Strain : Bifidobacterium adolescentis ATCC 15703 Genome accession: NC_008618 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 715102 - 717696 bp Length : 2595 bp Strand : + Note : Orthologue of Rv3596c_BL0010; ProbableclpC1_ ATP-dependent protease ATP-binding subunit (EC3.4.-.-) DNA sequence : ATGTTCGAACGGTTTACCGACCGTGCGCGACGCGTGATTGTGTTGGCGCAGGAAGAAGCTCGGACCCTCCAGCACAACTA CATCGGCACCGAGCATCTGCTGCTGGGCCTGATTCGTGAGGGTGAAGGCGTTGCCGCCAAGGCATTGGCCTCGAAGGGCG TGACCTTGGACGACACCCGCAAGCAGGTCGAAGAGATGATCGGCAAGGGAAATGCGTCGCCGAACGGCCACATTCCCTTC ACCCCGCATGCCAGGCAGGTGTTGGAGCTGTCGCTACGTGAGGCGTTGCAGCTGGGGCACAGCTATATCGGCACCGAGCA TATCCTGCTCGGTCTGATTCATGAGGGCGAAGGCGTCGGCACACAGGTGCTGATCAAGATGGATGTCAACCTTGGCGAAC TGCGTAGCGCCACCATCGATCTGATCCGAGGCAATTCCAGCGACGGCAAGAACGATAGCAAGGGCGAACTCGCCAATGCC GGTGGCGTGCAGGACCGTCGCAATCAGACCGGTTCCGCGATTCTCGACCAGTTCGGCCGCAACCTTACGGCTGAGGCTGC CGCTGGGAAGCTCGATCCGGTAATCGGACGATCCAACGAGATCGAGCGTGTGATGGTGGTGTTGAGCCGCCGCACCAAGA ACAACCCGGTGCTGATCGGCGAGCCTGGCGTAGGCAAGACCGCGGTGGTCGAAGGACTCGCGCAGAAGATCAACGCCGGT GATGTGCCGGAAACGCTGAAAGGCAAGCAGGTCTACTCCTTGGACCTCGGTTCCATGGTTGCTGGTTCCCGCTACCGTGG CGATTTCGAGGAACGCCTGAAGAAGGTTTTGAAGGAGATCAAAACCCGCGGCGACATCGTGCTGTTCATCGATGAGATTC ACACCATCGTGGGCGCAGGCTCCGCGGATGGCGCCTTGGGCGCTTCCGATATGTTGAAGCCGATGCTGGCCCGTGGCGAA CTGCAGACCATCGGCGCGACCACCACCGACGAGTACCGCAAGTACATCGAGAAGGATGCCGCGCTGGAACGTCGTTTCCA GCCGATCCAGGTGCACGAGCCGACCATCGCCGAGACCATTGAGATTCTGAAGGGCTTGCGTGAGCGTTACGAGAACCACC ATCATGTGACGATCACCGATGGCGCGCTGCAGGCCGCGGCGGAACTTTCCAGCCGCTACATTCAGGACCGCCACCTGCCC GACAAGGCCATCGATCTGATCGATGAGGCCGGCGCCCGACTGCGTATCCGCAGGCTCACCGCTCCGCCGGAGCTCAAGGA ATTGGACGCCAAGGCTGCCAAGCTGGCCGAGGAGAAGGACCAGGCCATCAAGGACCAGGACTTTGAGAAGGCCGCCGAGC TGCGTGACAAGCAGGAGAAGATCGAGTCCGAGCGCAAGGAGAAGGAATCCGCTTGGCGTGAGGGCGAGTCCGATGTGAAG ATGGTGGTGGATGAGGACGTCATCGCTGAGGTGATTTCCCAGACCACCGGCATTCCGGTGTTCAAGCTCACCCAGGCCGA GTCCAAGAAGCTCATGGGCATGGAGAGTGAACTGCACAAGCGCATCATCGGTCAGGATGAGGCTGTGTCCGCATTGAGCC GTTCCATCCGTCGCGCACGCGTCGGATTGAAGGATCCGAAGCGTCCGGCTGGCTCGTTCATCTTCGCTGGCCCGACCGGC GTTGGTAAGACCGAGCTGGCCAAGGCTCTCGCCGAATTCCTGTTCGACGATGAGGATGCGCTGATCCGCGTGGACATGTC GGAATTCTCCGAAAAGTACGCCGCGTCGCGCCTGTTCGGTGCGCCTCCGGGATACGTCGGCTACGAAGAAGGCGGCGAAC TTACCGAAAAGGTGCGTCGCAAGCCGTTCTCCGTGGTGTTGTTCGACGAAATCGAAAAAGCCCATCCGGACATTTTCAAC ACGCTGTTGCAGGTGCTGGACGATGGCCATCTGACCGATGGCCAGGGACGCAAGGTGGACTTCAAGAACACCATCATCAT CCTGACCACCAACCTCGGCACTCGTGACATCGCCAAGGCCGCCAACACCGGTTTCAACCTGGGCACGAACACCGAATCGA GCTACCAGCGCATGAAGGAACAGGTCTCCGCCGAACTCAAGCAGCAGTTCCGTCCGGAGTTCCTGAACCGTCTGGATGAC ATCATCGTGTTCAAGCAGCTCACCGAACCGCAGGTGCGTCAGATCGTCGACTTGGATGTCAAGCAGCTCAACGACCGTCT GTTCGACCGTCACATGTCGCTCGAACTGACCGACGCGGCCAAGGATCTGCTCGCACAGAAGGGCTTCGACCCGCTGCTGG GCGCCCGTCCGCTGCGTCGCGTGATTCAGCGCGACATCGAGGACGCCATTTCGGAGAAGATCCTGATGGGCGACCTCGAA GATGGCCAGCGCGTGAGGGTGGACGCCGAAGGCGAAGGCATTCTGGGTGAGTTCACGTTCACCGGCGAGGCCTTCGAAGA GCCGAACCAGAAGGATAATCCGGCGGAGGCGACCGAAACGGCCACTGAAACCGATGCCGCCACTGAACCGACGGCATCGA CGGAACCGGCTGATTCCGCGCAGTCACAGAACTGA Protein sequence : MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGNASPNGHIPF TPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATIDLIRGNSSDGKNDSKGELANA GGVQDRRNQTGSAILDQFGRNLTAEAAAGKLDPVIGRSNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAG DVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHHVTITDGALQAAAELSSRYIQDRHLP DKAIDLIDEAGARLRIRRLTAPPELKELDAKAAKLAEEKDQAIKDQDFEKAAELRDKQEKIESERKEKESAWREGESDVK MVVDEDVIAEVISQTTGIPVFKLTQAESKKLMGMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPAGSFIFAGPTG VGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFN TLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGTNTESSYQRMKEQVSAELKQQFRPEFLNRLDD IIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLE DGQRVRVDAEGEGILGEFTFTGEAFEEPNQKDNPAEATETATETDAATEPTASTEPADSAQSQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC1 | YP_909436.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 57 |
| clpC1 | YP_909436.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 2e-136 | 50 |
