|
Name : rplS (BAD_0232) Accession : YP_909095.1 Strain : Bifidobacterium adolescentis ATCC 15703 Genome accession: NC_008618 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 305697 - 306098 bp Length : 402 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : GTGCGCCGATATGCGGCGGCGACTCGAGGAAACACAATGGTTAACGCTATTGAGGCATTTGACGCCAAGCACATGAAGCC GGCCGAGGAAATCCCGGCTTTCCGTCCCGGTGACACCGTCGAAGTCAACGTGAAGATCAAGGAAGGCAACAACTCCCGTA TCCAGGCCTTCACCGGCGTGGTGATCGCTCGTCAGGGCGGCGGCGTTCGTGAGACCTTCGTGGTCCGCAAGATCAGCTTC GGCACCGGTGTCGAGCGCCGCTTCCCGCTGCACTCCCCGGCCATCGATTCCATCAAGGTGGTCCGCAAGGGCCGCGTGCG TCGCGCCAAGCTGTACTACCTGCGCAACCTGCGCGGTAAGGCCGCTCGTATCGTCGAGCGCCGCGACAACTCCGAGAAGT GA Protein sequence : MRRYAAATRGNTMVNAIEAFDAKHMKPAEEIPAFRPGDTVEVNVKIKEGNNSRIQAFTGVVIARQGGGVRETFVVRKISF GTGVERRFPLHSPAIDSIKVVRKGRVRRAKLYYLRNLRGKAARIVERRDNSEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-23 | 58 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 2e-21 | 58 |
