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Name : clpB (BAD_1464) Accession : YP_910327.1 Strain : Bifidobacterium adolescentis ATCC 15703 Genome accession: NC_008618 Putative virulence/resistance : Virulence Product : chaperone clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1845569 - 1848286 bp Length : 2718 bp Strand : - Note : Orthologue of Rv0384c_BL1250; Probable clpB(alternate gene name: htpM)_ endopeptidase ATP-bindingprotein_ chain B (EC 3.-.-.-) DNA sequence : ATGGAACAGAAGTTCACGCAGATGGCGCAGGAAGCGCTTTCGGACGCCGTTCAGAACGCGGCGGCGCTGGGCAATCCGCA GGTAGACACCCTGCACCTGCTGGACGCGATGCTGCGTCAGGAAAACAGCATGGCCCGCGCGCTCATCGAAGCGGCAGGCG GCAACGCGCAAAACGTGAGCGCCGAAGTGCATCAGGCGATGCAATCGCTGCCGAGCGCCAGCGGATCGACCACAACGCAG CCGGACGTCAGCAGGCAGCTGTCGGCGGTGCTATCGCAAGCCGAAAAAGAAATGCAACGGAGGGGAGACGAGTACGTCAC CGTCGACCTCATGCTGGTCGCAATCGCGGCCGCGAAACCTAATCAAAGCGCGGACATCTTGGAAAAGAACGGTCTTACCG CGGATAAGCTGCGTAACGCCCTGACCGCCGCGCGCGGCAGCGACCGCAAGGTGACCAGCGCCGACGCGGAAGGCTCGTAT AAAGCTTTGGAGAAGTACTCCACCGATTTGACGGCCGCCGCGAAGGAAGGCAAGCTCGACCCGGTGATCGGCCGCGACCA GGAAATCCGCCGCGTCATCCAGATCCTGTCCCGCCGTACCAAGAACAATCCTGTGCTGATCGGCGAGCCTGGCGTCGGCA AAACCGCCGTCGTCGAAGGCCTGGCGCAGCGCATCGTCGCCGGCGACGTGCCGACCACCCTGCAGAACAAGAAGCTTATC TCGCTTGACCTGGGCTCCATGGTGGCTGGTTCCAAGTACCGTGGCGAATTCGAGGAACGTCTGAAGAGCGTGCTTGAGGA GATCAAGAAGGCCGACGGGCAGATCATCACCTTCATCGACGAGATCCACACCATCGTCGGCGCGGGCGCGGCCGAAGGCT CCATGGACGCGGGCAATATGCTCAAGCCCATGCTGGCCCGTGGCGAACTGCGCCTGATCGGCGCCACCACACTGGACGAA TACCGTGAGAACATCGAAAAGGATCCGGCGCTCGAACGTCGTTTCCAGCAGGTGTTCGTCGGCGAGCCGAGCGTGGAGGA CACCGTCGCCATCCTGCGCGGCATCGCGCCGAAGTATGAGGCCCACCACAAGGTGACCATCGGCGACGACGCGCTGGTCG CGGCGGCAACCCTGTCGAACCGCTACATTTCCGGACGCCAGCTGCCGGACAAGGCCATCGATCTGGTGGACGAGGCCGCA GCGCACCTGCGCATGGAACTCGACTCCTCGCCTGAGGAAATCGACGAACTGCGCCGCCAGGTGGACCGTCTCAAGATGGA GAAGTCGTACCTGCTGGGCAATCCGAAGAACGACAAGGCCACGGAAAAGGCCGAAGCGGAACTGGACGACAGCGCCAAGG ACCGTCTCGCCGATTTGAACCAGGAAATCGCCGACAAAAGCGAAAAGCTCAACGGGCTGAAAGCGCGTTGGGACGCCGAA AAGAACGGCCACAACCGTATCGGCGACCTGCGCAAGAAGCTCGACGAGCTGCGTACGCAAGCCGAAAAGTACGAGCGCGA AGGCGACCTGGCGAAATCGTCAGCCATCAACTACGGCGAAATCCCGGCCATCCAGAAGGAAATCGCCCAAGCCGAGAAGA ACGAGGCGGAATCGGGCGGAGCCGACAATGCCAACGCCGACGTGCCGATGGTCCCCGACCGCGTCGACGCCGACTCCATC GCCGAAATCGTCTCCGACTGGACCGGCATCCCCGTGGGCCGTCTTATGCAGGGCGAAAACGAGAAGCTCCTGCACATGGA GGAGTACCTCGGCAAGCGTGTGATCGGCCAGAAGGAAGCCATCCAAGCGGTTTCCGACGCCGTGCGTCGCTCGCGTGCCG GCATCTCCGACCCGAACCGTCCGACCGGATCGTTCCTGTTCCTCGGCCCCACCGGCGTGGGCAAGACCGAACTGGCCAAG GCGCTCGCCGACTTCCTATTCGATGACGAGAAGGCCATGGTGCGCATCGACATGAGCGAATACATGGAGAAGGCCTCCGT GTCCCGCCTGATCGGCGCCGCGCCGGGCTACATCGGCTACGAAGAGGGTGGCCAGCTTACCGAAGCCGTGCGTCGCCGTC CGTATTCGGTGGTGCTGTTCGACGAGGTGGAGAAGGCCAATCCGGAAGTCTTCGACGTGCTGCTGCAGGTGCTTGACGAC GGTCGCCTGACCGACGGCCAGGGCAGGACCGTGGACTTCAAGAACACGATTCTGATCATGACCTCCAACCTGGGCTCGCA GTTCCTCGTCAATCCCGACATGGACGCGGACGCCAAGAAGAAGGCCGTGATGGACGCCGTGCACATGCAGTTCAAGCCGG AATTCATCAACCGTCTGGACGAACTGGTCATGTTCCACCCGCTGACCCGCGAGGAGCTCGGCGGCATCGTGGACATTCAG GTCGCGCAGGTGTCCGCACGTCTGACCGACCGCCGCATCACGCTCGACGTGACCGATTCGGCGCGCGAATGGCTTGCCAA CACCGGTTACGATCCGGCGTACGGCGCACGTCCGCTGCGTCGCCTGGTGCAGACCGAAGTCGGCGACCAGCTTGCCCGCA TGCTGCTGGCCGGCGAAGTGCACGACGGCGACACCGTGCTGGTGGACCAGACCGGCGGCGACCACCTGGAGCTGTCCGCG TGGGCCGCGGACCAGCTGGAGGATATGGGCGAGGGGAAGACGGACGATTCCGCCGACGTCCCGAACCCGGCTGAGTGA Protein sequence : MEQKFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAEVHQAMQSLPSASGSTTTQ PDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQSADILEKNGLTADKLRNALTAARGSDRKVTSADAEGSY KALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI SLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDE YRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAA AHLRMELDSSPEEIDELRRQVDRLKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAE KNGHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGGADNANADVPMVPDRVDADSI AEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEAIQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAK ALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDD GRLTDGQGRTVDFKNTILIMTSNLGSQFLVNPDMDADAKKKAVMDAVHMQFKPEFINRLDELVMFHPLTREELGGIVDIQ VAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGEVHDGDTVLVDQTGGDHLELSA WAADQLEDMGEGKTDDSADVPNPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-107 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-109 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-109 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_910327.1 | chaperone clpB | VFG2084 | Protein | 4e-113 | 43 |
