Gene Information

Name : Rmag_0887 (Rmag_0887)
Accession : YP_904073.1
Strain : Candidatus Ruthia magnifica Cm
Genome accession: NC_008610
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 948984 - 949544 bp
Length : 561 bp
Strand : -
Note : PFAM: sugar transferase; KEGG: dar:Daro_1277 sugar transferase

DNA sequence : 
ATGAAAAGAGGATTTGATTTGTTGTTGGTTATAATTTGTACTTCGTTAATGTTGTTGCCGATTATTGTAGTGGCTGTATT
AGTTAAATCAACCTTAAAGGGCAGTATACTTTATTGGTCAGATAGAGTCGGAAAAAATAATATTATTTTTAATATGCCAA
AGTTTCGTACAATGCGAATGAATACCCCCATTATAGCAAAACACTTGTTAAACAATCCAAGTACTTATTTATCGCCTATT
GGTGAGTTTTTGCGACGTACAAGTTTGGATGAATTGCCACAATTGTATTCAATCTTAAAAGGTGATATGAGCTTTGTGGG
GCCACGACCTGCACTGTTTAACCAAGAGGATTTAATTGCTTTGCGCACTAAAAAAGGAGTGTATAAATTATTGCCGGGCG
TCACTGGTTGGGCGCAAGTTAATGGGCGAGATACATTGTCAATTATTGATAAAGTTAATTTAGATATAGAGTATATAGCT
TATCAGTCATTTTGGTTTGACATAAGAATATTATGGATGACTTTTTTAAAAGTTATTAAACGAGAAAACGTGTCTCATTA
A

Protein sequence : 
MKRGFDLLLVIICTSLMLLPIIVVAVLVKSTLKGSILYWSDRVGKNNIIFNMPKFRTMRMNTPIIAKHLLNNPSTYLSPI
GEFLRRTSLDELPQLYSILKGDMSFVGPRPALFNQEDLIALRTKKGVYKLLPGVTGWAQVNGRDTLSIIDKVNLDIEYIA
YQSFWFDIRILWMTFLKVIKRENVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 7e-32 46
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmag_0887 YP_904073.1 sugar transferase VFG1369 Protein 9e-26 46
Rmag_0887 YP_904073.1 sugar transferase VFG1309 Protein 2e-29 43