Gene Information

Name : Rmag_0800 (Rmag_0800)
Accession : YP_903992.1
Strain : Candidatus Ruthia magnifica Cm
Genome accession: NC_008610
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 850241 - 851290 bp
Length : 1050 bp
Strand : +
Note : KEGG: vpa:VP0679 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifuncti

DNA sequence : 
ATGTCAGCAACTTTTTCAAAAAATGACACTCAAAATATGGTGATTGCTCTCAAACTTGCCAGCCAAGGAAAATACGGTGT
AAAGTCCAATCCTATGGTCGGTTGTGTGATTGTAAAACATACAAAAATTATTGCCAAAGGCTACCACCAAACCTTTGGTA
AAGCGCACGGGGAAATTAACGCCTTACAACAAATTAACCACCAAGCTCAGGGTGCTACATTTTACGTCACCTTAGAACCT
TGTTCACATCAAGGAAAAACTCCATCTTGTGCACAAGCCATTATTCACTCAGGCGTTAAAAAAGTTATTATTGCTATGCT
TGATCCCAATCCACTGGTCAATGGTAAAGGCGTTGTCATGCTTGAAAATGCAGGTATTGAAGTTAAAATTGGCTTGTTAG
AAAATGATGCATTAACTCTTAATCAAGGATTTATCAAATACATGAAAACCAATAAACCTTTTGTGCGTTGCAAAATAGCC
ATGAGTCTTGATGGCAAAACCTCAATGAGCTCAGGTGAAAGTAAATGGATTACTTCAGAAGTCACAAGATTGGACGTACA
AAAACTACGCGCTAACCATCAAGCAATTATGACTGGATCGGGCACAATTATTAATGACAACCCTTTAATGACAGTGCGTC
TTGATAATATCAATTTAACGCCACTACGTGTTGTGATTGATAGTAAAAATCAAATAACAAATACCTCCCTTAATATATTT
AACGCCGACGCACCAACACTAATCTTAAACCCAACCAACACTAAAACACTTTCCTCTGGAAAACTGGACCTTGGTAATGT
TTTAACTCAATTAGGCAATCAAGGCATTAACAATGTCTTACTTGAAGCGGGGCCTAAATTAATCGGTTCTATGATTAAAA
GCAACTTAATTGATGAATTTATTATTTATATGGCACCCATATTGATGGGTAGTAATGCCAATTCAATGCTTAATCTAGTT
ATTAAAAATATGGCTCATAAAATTAAGTTGAATATTGTTGATGTTAGAATGGTGAGTAATGACATAAAAATAACAGCCAC
TTTAAAATGA

Protein sequence : 
MSATFSKNDTQNMVIALKLASQGKYGVKSNPMVGCVIVKHTKIIAKGYHQTFGKAHGEINALQQINHQAQGATFYVTLEP
CSHQGKTPSCAQAIIHSGVKKVIIAMLDPNPLVNGKGVVMLENAGIEVKIGLLENDALTLNQGFIKYMKTNKPFVRCKIA
MSLDGKTSMSSGESKWITSEVTRLDVQKLRANHQAIMTGSGTIINDNPLMTVRLDNINLTPLRVVIDSKNQITNTSLNIF
NADAPTLILNPTNTKTLSSGKLDLGNVLTQLGNQGINNVLLEAGPKLIGSMIKSNLIDEFIIYMAPILMGSNANSMLNLV
IKNMAHKIKLNIVDVRMVSNDIKITATLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-60 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-60 45